| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_0793 |
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| Symbol | |
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| ID | 4580617 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | + |
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| Start bp | 766214 |
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| End bp | 767239 |
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| Gene Length | 1026 bp |
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| Protein Length | 341 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639768112 |
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| Product | cationic amino acid ABC transporter, periplasmic binding protein |
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| Protein accession | YP_914601 |
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| Protein GI | 119383545 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | [TIGR01096] lysine-arginine-ornithine-binding periplasmic protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0819733 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAAAT CTGTATTCTT CGGCTCTGTG ACGGCGGTCG CGCTGGCGGC CTCGGGTGCC
TTGGCCGCAG AAGGCGACAC GCTGAAGGAG GTCAAGGCCC GCGGGGTGCT GAACTGCGGC
GTGAATACCG GCCTGATCGG CTTCGCCGCC CCTGACGCGA ACGGCAACTG GTCCGGCTTC
GACGTCGCCT TCTGCAAGGC CATGGCCGCG GCCGTGCTGG GCGATGCGAC CAAGATCAAA
TATGTGCCGA CCACCGGCCA GACCCGCTTC ACGGCGCTTT CCTCGGGCGA GGTGGACCTT
CTGGCCCGCA ACTCCACCTG GACCTTCCAG CGCGACACCG ACCTCAAGCT CGACTTCATC
GGCGTCAACT ACTACGACGG CCAGGGCTTC ATGGTCCGCA AGGATCTGGG CGTCAGCTCG
GCGAAAGAGC TGAACGGCGC CACGATCTGC ATCCAGACCG GCACCACGAC CGAGCTGAAC
CTGGCCGATT ACTTCAAGGC CAACAACATG GACTACCAGC CGGTCAACAT CGACAGCAAC
GCCGAGGGCG AACAGCAATA CATGGCCGGC GCCTGCGATG CCTATACCAC CGACGCCTCG
GGCCTGGCCG CGACCCGCGC CAGCTTTGCC GACCCGGAAA ACCACATCAT CCTGCCCGAG
ATCATCTCGA AAGAGCCCTT GGGCCCGGCG GTGCGCCATG GCGACAACAA CTGGGGCGAC
ATCGCGCGCT GGACGCTTTA CGCGCTGATC GCCGCCGAGG AATACGGCGT CACCTCGGCC
AATATCGACG AGCTGGCGAA ATCCTCGCAG AACCCGGAAG TCCAGCGCCT GCTGGGCACC
ACCGACGATC TGGGCAAGAT GATCGGGCTT GACGCCGAAT GGGCCAAGCG CGCCATCAAG
GCCGGCGGCA ACTATGGCGA GATCTTTGCC GCCACCATCG GCGAACAGAC CCCGATCGGC
CTGGCGCGCG GCCTGAACGC GCAATGGACC CAAGGCGGGC TGATGTATGC GATGCCCTTC
CGGTAA
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| Protein sequence | MKKSVFFGSV TAVALAASGA LAAEGDTLKE VKARGVLNCG VNTGLIGFAA PDANGNWSGF
DVAFCKAMAA AVLGDATKIK YVPTTGQTRF TALSSGEVDL LARNSTWTFQ RDTDLKLDFI
GVNYYDGQGF MVRKDLGVSS AKELNGATIC IQTGTTTELN LADYFKANNM DYQPVNIDSN
AEGEQQYMAG ACDAYTTDAS GLAATRASFA DPENHIILPE IISKEPLGPA VRHGDNNWGD
IARWTLYALI AAEEYGVTSA NIDELAKSSQ NPEVQRLLGT TDDLGKMIGL DAEWAKRAIK
AGGNYGEIFA ATIGEQTPIG LARGLNAQWT QGGLMYAMPF R
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