Gene Pden_0792 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_0792 
Symbol 
ID4580616 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp765351 
End bp766061 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content69% 
IMG OID639768111 
ProductATP12 ATPase 
Protein accessionYP_914600 
Protein GI119383544 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG5387] Chaperone required for the assembly of the mitochondrial F1-ATPase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.169116 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGAAT GGAAGGCGCG CCGTTTCTGG GCATCCGTCG GGATCCACAA GGAAGAGGGC 
GGCTGGGCCG TTCTGCTGGA CGAGCGTCCC CTGCGCACGC CGGGCAAGCA GCCGCTGCGC
CTGCCGACCG AGGCGCTGGC GCTGGCCATC GCCGAGGAAT GGCAGGCGGT GCAGGAGGTG
ATCGACCCTA ATGCGATGCC GCTGACCCGC TCGGCCAATT CCGCCATCGA GAAGGTGGCG
CCGCAATTCG ACGCGGTGGC GGCGATGTTG GGCGATTATG GCGGCACGGA CCTGCTGTCC
TATCGCGCCG ACGCGCCCGA GGCGCTGGTG CGCGCCCAGG CCGAGGGCTG GGATCCGCTG
ATCGACTGGG CGGCGACCGA ACTGCGGGCG CCGCTGCGCA TCACCCATGG CGTGATCCCG
GTGCCGCAGG ATCCGGTCGT TCTGCTGAAA TTGCGGGCAG AGGTCGCATC GCTCGATCCC
TTCGGGCTGA CGGCGCTGCA CGATCTGGTG ACTCTGCCGG GCTCGCTGAT CCTGGGGCTG
GCGGTGATTC GGGGGCGGAT CGACGCGCCG ACCGCCCATG CCCTGTCCCG GATTGACGAG
GAATTTCAGG CAGAACGCTG GGGCCGGGAC GAGGAGGCCG AGGCGCAGGC CGCAAGCCGT
CTGGCCGCGA TGCGCGATTC TGAGCGGTTC TGGCATCTCA CCCGCGGCTG A
 
Protein sequence
MSEWKARRFW ASVGIHKEEG GWAVLLDERP LRTPGKQPLR LPTEALALAI AEEWQAVQEV 
IDPNAMPLTR SANSAIEKVA PQFDAVAAML GDYGGTDLLS YRADAPEALV RAQAEGWDPL
IDWAATELRA PLRITHGVIP VPQDPVVLLK LRAEVASLDP FGLTALHDLV TLPGSLILGL
AVIRGRIDAP TAHALSRIDE EFQAERWGRD EEAEAQAASR LAAMRDSERF WHLTRG