| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_0776 |
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| Symbol | rpsE |
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| ID | 4579995 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | + |
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| Start bp | 753236 |
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| End bp | 753802 |
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| Gene Length | 567 bp |
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| Protein Length | 188 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639768095 |
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| Product | 30S ribosomal protein S5 |
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| Protein accession | YP_914584 |
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| Protein GI | 119383528 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0098] Ribosomal protein S5 |
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| TIGRFAM ID | [TIGR01021] ribosomal protein S5, bacterial/organelle type |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.0981589 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.839381 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCAGAAC GTGAACACCG TCGGGGCCGC CGCGAAGAGC GCGAGGAAAC CCCGGAATTC
GCCGATCGTC TGGTGGCGAT CAACCGCGTG TCGAAAACCG TCAAGGGCGG CAAGCGCTTC
GGCTTTGCCG CTCTGGTGGT CGTGGGCGAC CAGCGTGGCC GCGTCGGCTT CGGCAAGGGC
AAGGCCAAGG AAGTGCCCGA GGCGATCCGC AAGGCGACCG AGCAGGCCAA GCGCAGCCTT
ATCCGCGTGC CGCTGCGCGA CGGCCGCACC CTGCACCATG ACATCGAGGG GCGTCACGGC
GCCGGCAAGG TGATCATGCG CACCGCCGTT CCGGGCACGG GCATCATCGC CGGCGGCCCG
ATGCGCGCCG TGTTCGAGAT GCTGGGCGTC CAGGACGTGG TGGCCAAGTC GCAGGGGTCG
CAAAACCCCT ACAACATGAT CCGCGCCACC ATCGACGGCC TCAAGAAGGA AGCCTCGCCC
CGCAACGTCG CACAGCGCCG CGGCAAGAAG GTGGCCGAGA TCCTGCCGTC CAACGACAAG
CCGGCCGAAG CCGCCGTCGA AGCGTAA
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| Protein sequence | MAEREHRRGR REEREETPEF ADRLVAINRV SKTVKGGKRF GFAALVVVGD QRGRVGFGKG
KAKEVPEAIR KATEQAKRSL IRVPLRDGRT LHHDIEGRHG AGKVIMRTAV PGTGIIAGGP
MRAVFEMLGV QDVVAKSQGS QNPYNMIRAT IDGLKKEASP RNVAQRRGKK VAEILPSNDK
PAEAAVEA
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