Gene Pden_0756 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_0756 
Symbol 
ID4580054 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp742372 
End bp743547 
Gene Length1176 bp 
Protein Length391 aa 
Translation table11 
GC content64% 
IMG OID639768075 
Productelongation factor Tu 
Protein accessionYP_914564 
Protein GI119383508 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0050] GTPases - translation elongation factors 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR00485] translation elongation factor TU 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.097757 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.469461 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAAGG CAAAGTTTGA ACGGACGAAA CCGCACGTCA ACATTGGGAC GATTGGTCAC 
GTTGACCACG GCAAGACGAC GTTGACGGCC GCGATCACCA AGTATTTTGG TGAATTCAAG
GCCTACGACC AGATTGACGG CGCTCCCGAG GAGCGTGCCC GCGGGATCAC GATCTCGACG
GCGCATGTTG AATACGAGTC GGAGAACCGT CACTACGCGC ATGTGGACTG CCCCGGCCAC
GCGGACTACG TGAAGAACAT GATCACGGGT GCGGCGCAGA TGGACGGCGC GATCCTGGTG
GTGAACGCGG CCGACGGCCC GATGCCGCAG ACGCGCGAGC ACATCCTGCT GGGCCGGCAG
GTGGGCATTC CCTACATGGT GGTGTACCTG AACAAGGTCG ACCAGGTGGA CGACCCCGAG
CTTCTGGAAC TGGTCGAGAT GGAAGTGCGC GAGCTTCTGT CGTCCTACGA CTATCCCGGC
GACGACATTC CGATCGTGAA GGGCTCGGCG CTGGCCGCCC TGGAAGGCCG CGACGCGGAG
ATCGGCGAGA ACTCGATCCG CGAGCTGATG AAGGCGGTGG ACGACTACAT CCCGACGCCC
GAGCGCGCCG TCGACCTGCC GTTCCTGATG CCGATCGAGG ACGTGTTCTC GATCTCGGGC
CGTGGCACGG TTGTGACCGG TCGCGTGGAG CGCGGCGCGG TGAACGTGGG CGACGAGCTT
GAGATCGTGG GCATCCGTCC GACGAAGAAG ACGACCTGCA CGGGCGTCGA GATGTTCCGC
AAGCTGCTGG ATCGCGGGGA AGCGGGCGAC AACATCGGCG CGCTGCTGCG CGGTGTGGAG
CGTGACGGCG TCGAGCGCGG GCAGGTCCTT GCGAAGCCCG GCTCGGTGAC GCCGCATACC
GAGTTCGAGG CCGAGGCTTA CATCCTGACC AAGGAAGAGG GTGGCCGTCA CACGCCGTTC
TTCGCGAACT ACCGTCCGCA GTTCTACTTC CGGACGACGG ACGTGACCGG GACGGTGAAG
CTGCCGGAAG GCACCGAGAT GGTGATGCCT GGCGACAACC TGAAGTTCGA GGTGGAGCTG
ATCGCTCCGA TCGCGATGGA AGAGAAGCTG CGCTTCGCGA TCCGCGAGGG CGGCCGCACG
GTCGGCGCCG GCGTGGTGTC GAAGATCCTG AAGTGA
 
Protein sequence
MAKAKFERTK PHVNIGTIGH VDHGKTTLTA AITKYFGEFK AYDQIDGAPE ERARGITIST 
AHVEYESENR HYAHVDCPGH ADYVKNMITG AAQMDGAILV VNAADGPMPQ TREHILLGRQ
VGIPYMVVYL NKVDQVDDPE LLELVEMEVR ELLSSYDYPG DDIPIVKGSA LAALEGRDAE
IGENSIRELM KAVDDYIPTP ERAVDLPFLM PIEDVFSISG RGTVVTGRVE RGAVNVGDEL
EIVGIRPTKK TTCTGVEMFR KLLDRGEAGD NIGALLRGVE RDGVERGQVL AKPGSVTPHT
EFEAEAYILT KEEGGRHTPF FANYRPQFYF RTTDVTGTVK LPEGTEMVMP GDNLKFEVEL
IAPIAMEEKL RFAIREGGRT VGAGVVSKIL K