| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_0744 |
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| Symbol | rplA |
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| ID | 4579612 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | + |
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| Start bp | 725499 |
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| End bp | 726200 |
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| Gene Length | 702 bp |
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| Protein Length | 233 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639768063 |
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| Product | 50S ribosomal protein L1 |
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| Protein accession | YP_914552 |
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| Protein GI | 119383496 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0081] Ribosomal protein L1 |
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| TIGRFAM ID | [TIGR01169] ribosomal protein L1, bacterial/chloroplast |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.00583178 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGGCTAAAC TGTCGAAAAA ACAAGTCTCC GCCCGTGCTG CCTTTGCCGG CAAGTCGAAC
CTCGCGGTCG AGGAAGCCGT CAAGCTGGTC AAGGAAAACG CCAGCGCGAA ATTCGACGAG
ACCGTCGAGA TCGCGATGAA CCTGGGCGTC GATCCGCGCC ATGCCGACCA GATGGTCCGC
GGCGTCGTGA CCCTGCCCAA CGGCACCGGC AAGGACGTGC GCGTCGCCGT CTTCGCCCGC
GGCCCCAAGG CTGACGAAGC CAAGGCGGCC GGCGCCGAGA TCGTCGGTGC GGAAGACCTG
ATGGAGACGA TCCAGTCGGG CAAGATCGAG TTCGATCGCT GCATCGCCAC CCCGGACATG
ATGCCGCTGG TCGGCCGTCT GGGCAAGATC CTGGGCCCGC GCAACCTGAT GCCGAACCCC
AAGGTCGGCA CGGTGACGAT GGACGTGAAG GCTGCCGTCG AAGCCGCCAA GGGCGGCGAG
GTCCAGTTCA AGGCCGAGAA GGCGGGCGTG GTCCATGCCG GCGTCGGCAA GGCCTCGTTC
GAGATCGAGA AGCTGGCCGA GAACATCCGC GCCTTCGTGG ATGCGGTGAA CCGTGCGAAG
CCCTCGGGCG CCAAGGGCAC CTATGTGAAG AAGGTCTCGA TCAGCTCGAC CATGGGTCCG
GGCGTGTCGC TGGACCTGGG CTCGACCGCC GCGGCGCAGT AA
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| Protein sequence | MAKLSKKQVS ARAAFAGKSN LAVEEAVKLV KENASAKFDE TVEIAMNLGV DPRHADQMVR
GVVTLPNGTG KDVRVAVFAR GPKADEAKAA GAEIVGAEDL METIQSGKIE FDRCIATPDM
MPLVGRLGKI LGPRNLMPNP KVGTVTMDVK AAVEAAKGGE VQFKAEKAGV VHAGVGKASF
EIEKLAENIR AFVDAVNRAK PSGAKGTYVK KVSISSTMGP GVSLDLGSTA AAQ
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