| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_0729 |
|---|
| Symbol | |
|---|
| ID | 4579597 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Paracoccus denitrificans PD1222 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008686 |
|---|
| Strand | - |
|---|
| Start bp | 710813 |
|---|
| End bp | 711985 |
|---|
| Gene Length | 1173 bp |
|---|
| Protein Length | 390 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 639768047 |
|---|
| Product | aminotransferase, class V |
|---|
| Protein accession | YP_914537 |
|---|
| Protein GI | 119383481 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0075] Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.434547 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.30406 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCTTTG CCCAGGGCCG CGCCGTCCTT GCCATCCCCG GCCCCTCGCC CGTTCCCGAC
CGCGTGCTGC GCGCCATGCA TCGCGCCTCG CCCGACATCT ACGGCCCCGA ACTCGCGGCC
GAGAACCGCG CCATGATCGC CGGGCTGAAA CGGCTGGCCG GCACCGCGGG CCATGTCGCG
CCCTATATCG GCAACGGCCA TGCCGGCTGG GAGGCGGCCA ATGTCAACCT GCTCGACCGG
GGCGAGCGGG CCCTGGCGCT GGTCTCGGGC CATTTCGGCC GCAGCTGGGC CGCCTCGGCC
CGCGCGCTGG GGATCGAGGT CGAGGAGCTG GATTTCGACC TCGCGCCCCC CGATCCGCAG
CGCCTGGCCG ACCGACTGGC GCAGGACCGC GAGGGGCGGA TCCGGGCGGT GCTGGTCTGC
CAGGTCGATA CCGCAAGCTC CGCCCGCGCC GACATTCCCG CCCTGCGCGC CGCCATGGGC
GACCATCCCG TCTTCCTGGC CGTCGATGCC ATCGCCTCGC TGGGCTGCGA GCCGATGCGG
ATGGACGAAT GGGGCGTCGA TCTGCTGGTC TCGGCCAGCC AGAAGGGGCT GATGGTGCCG
CCGGGCCTGA CCTTCGTCTG GTTCTCGGAC CGGGTGAAGG CGCGGGCGCG CAGCGGCCTT
GCCACGCCCT ATTGGGACTG GACCCCGCGC GCCGAGGCAG AGGAGCTCTG GCAGTTCTGG
GGCGGCACGC CGCCCGTTCA GCACATCTTC GGCCTGAACG AGGCGCTGCA TATCTTGCTG
GACGAGGAAA CCCTGCCCGC CGCATGGGCG CGGCACGAGG GGCTGGCGCA GGCGACTTGG
GCGGCACTGG ACCACTGGGG TGCGGGCGGC CATGGCATCG GCCCGCTGAT CGCCGATCCC
GCCGGTCGTG CCCGTTCCGT CACCGCGGCC CGCCTTCCGA ATGCCGCCGC CCTGCGCGAA
TGGACCGCCG CCAAGGCGGG GGTCACGCTG GGCATCGGCC TTGGCGCCCC CGATCCCGAC
AACGCGCTGC GCATCGCGCA TATGGGCCAT GCCAATGCCC ATCAGCTTCT GGGCGTGCTG
GCCGTGATCG AGGCCGGGAT GGCCGCGCTG TCCATCCCGC ATGGCAAGGG CGCGCTGGAG
GCTGCGGCGG CCGAGATCGC CCGGCTCGCA TGA
|
|---|
| Protein sequence | MSFAQGRAVL AIPGPSPVPD RVLRAMHRAS PDIYGPELAA ENRAMIAGLK RLAGTAGHVA
PYIGNGHAGW EAANVNLLDR GERALALVSG HFGRSWAASA RALGIEVEEL DFDLAPPDPQ
RLADRLAQDR EGRIRAVLVC QVDTASSARA DIPALRAAMG DHPVFLAVDA IASLGCEPMR
MDEWGVDLLV SASQKGLMVP PGLTFVWFSD RVKARARSGL ATPYWDWTPR AEAEELWQFW
GGTPPVQHIF GLNEALHILL DEETLPAAWA RHEGLAQATW AALDHWGAGG HGIGPLIADP
AGRARSVTAA RLPNAAALRE WTAAKAGVTL GIGLGAPDPD NALRIAHMGH ANAHQLLGVL
AVIEAGMAAL SIPHGKGALE AAAAEIARLA
|
|---|
| |