Gene Pden_0723 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_0723 
Symbol 
ID4579532 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp704594 
End bp705871 
Gene Length1278 bp 
Protein Length425 aa 
Translation table11 
GC content70% 
IMG OID639768041 
Producthypothetical protein 
Protein accessionYP_914531 
Protein GI119383475 
COG category[R] General function prediction only 
COG ID[COG1253] Hemolysins and related proteins containing CBS domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.622001 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGGATCG AAGTCCTTGT CGTCCTTGTC CTGACCCTGT TGAACGGGCT GCTGGCCATG 
TCGGAACTGG CCATCGTTTC GGCCCGCCCG GCCCGGCTGA AGGTTCTGGC CGAGCGCGGC
GACCGAGGCG CCGCCACCGC CCTGCAACTG GGCGAGGACC CGGGGCGGTT CCTGTCCTCG
GTCCAGATCG GCATCACGCT GGTCGGCATC CTGTCGGGCG CATTCTCCGG TGCGACGCTG
GGCGCGCGGC TGGCGGGGGC GCTGCCGGGC TGGGGCGTGC CGCCCTCGCT GGCGCAGCCC
CTGGGCATGG GCGGCGTGGT CGTCGCCATC ACCTATCTGT CGCTGATCGT GGGCGAACTG
GTGCCCAAGC AATTGGCGCT GAAGGCGCCC GAGCGGGTTG CGGCCCGCGT GGCGCCCCTG
ATGCTGGCCA TCTCGCGCGG GGCGGCGCCG CTGGTCTGGC TGCTCGACCG TTCGGGCAAG
CTGGTGCTGG CCGCGCTGGG ACAATCGGGC GAGGACAGGC AGACCATCAG CGACGAAGAG
ATCAAGCTGG TCATCTCGGA GGCCGAGACC GCGGGCGTCA TGCACCGGGC CGAGACCGAG
ATGATCGCCG GCGTCATGCG CATCGCCGAC CGCAGCGCGC GCGGGCTGAT GACGCCGCGG
CGCGAGATCG AGGCGGTCGA TGTCGGCGAC AGCTGGGAAG AGATGGCGCG CAAGTTCCGC
GACGGCCGCC GCACCCGCTT GCCGGTCAGC GACGGCGATC CGAACAACCT GATCGGCGTG
ATCGCCAGCG TGGATCTGAT GTCGCAAAGC CGGGCCGAGG CGGTGGACCT GCGCGAGGTG
ATGCAGCCCG CGCCGATCAT CCCCGAGACC ATGGATGCGC CCGAGGTCAT TGCGCGCCTG
CGCGCCGCGC CGGGGCAGAT GCTGCTGGTC TATGACGAAT ACGGCCATTT CGAGGGCGTG
GTGACGCCGA TGGACGTGCT GGAGGCGATC ACCGGCGAAT TCGCCGGGCT CGACGACGAC
GAGCCGAAGC TGGTCGAGCG CGAGGACGGC AGCCTGCTGG TGGCCGGCTG GATGCCGGTC
GACGAATTCG CCGACCGGCT TTCGGTGCCG CTGGACGAGG ATCGCGACTT TTCCACCGTC
GCGGGGCTGG TGCTGGATCT GGCCGGCCGG CTGCCGCAGG CGGGCGACCG CGTGGATTGG
CAGGGCTGGC GCATCGAGGT TGTGGACATG GACCATCGCC GCATCGACAA GTTGCTGGTC
CAGCGCCTGC CGGCCTGA
 
Protein sequence
MWIEVLVVLV LTLLNGLLAM SELAIVSARP ARLKVLAERG DRGAATALQL GEDPGRFLSS 
VQIGITLVGI LSGAFSGATL GARLAGALPG WGVPPSLAQP LGMGGVVVAI TYLSLIVGEL
VPKQLALKAP ERVAARVAPL MLAISRGAAP LVWLLDRSGK LVLAALGQSG EDRQTISDEE
IKLVISEAET AGVMHRAETE MIAGVMRIAD RSARGLMTPR REIEAVDVGD SWEEMARKFR
DGRRTRLPVS DGDPNNLIGV IASVDLMSQS RAEAVDLREV MQPAPIIPET MDAPEVIARL
RAAPGQMLLV YDEYGHFEGV VTPMDVLEAI TGEFAGLDDD EPKLVEREDG SLLVAGWMPV
DEFADRLSVP LDEDRDFSTV AGLVLDLAGR LPQAGDRVDW QGWRIEVVDM DHRRIDKLLV
QRLPA