Gene Pden_0720 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_0720 
Symbol 
ID4579529 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp701997 
End bp703100 
Gene Length1104 bp 
Protein Length367 aa 
Translation table11 
GC content70% 
IMG OID639768038 
ProductNADH:flavin oxidoreductase/NADH oxidase 
Protein accessionYP_914528 
Protein GI119383472 
COG category[C] Energy production and conversion 
COG ID[COG1902] NADH:flavin oxidoreductases, Old Yellow Enzyme family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.90981 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCCAAC CCAAACTTTT CGAGCCGATC GCCATCGGCG GCCAGACCCT TGCGAACCGG 
ATCGTCATCG CGCCGATGTG CATGTATTCG GCCGAGGACG GGCGGATGAC CGACTGGCAC
CTGATGCATC TGGGCGCGCT GTCGCATTCC GGCGCGGCGA TCCTGACCAT CGAAGCCACC
GCCGTCCTGC CCGAGGGACG CATCTCATAC GCCGATGTCG GGCTGTGGGA CGATGCGACC
GAGGCGGCCA TGGATCGGGT GCTGAAGGGC GTGCGGGCCT GGTCGGACAT GCCCATCGCC
ATCCAGCTGG CCCATGCCGG GCGCAAGGCC TCGACCGCGA AGCCCTGGGA CGGTGGCGCG
CAGATCGCGC CGGATGCGGA GCATGGCTGG CAGACCGTCT CGGCCTCGGA CCTGCCCTTC
GCCGAGGGCG AGAACCCTCC GGTCGCGCTG GATCGCGCGG GGCTGGCGCG GGTGCGCGAC
GGGTTTGCCG AGGCGGCGCG CCGTGCCGTG CGGCTGGGCA TCGATGCGAT CCAGATCCAT
GCCGCGCATG GCTATCTGCT GCATCAGTTC CTGTCGCCGC TGTCGAACCG GCGCGAGGAC
GAATATGGCG GCAGCCTGGA AAACCGCATG CGCTTTCCGC TGGAGGTCTT CGAGGCGGTG
CGGGACGCGG TGCCGCAGGG CTATCCGGTT ACGGTGCGCA TCTCGGGCAC CGACTGGGTC
GAGGGCGGCT GGGACATCGC CGGCAGCATC GCCTTTTCCC AGGCGCTGGA GGCGCGGGGT
TGCGCCGCGA TCCATGTCAG CAGCGGCGGG CTGGACAGGC GCCAGCAGAT CCCCGTCGGC
CCCAACTATC AGGTGCCGCT GGCGCGCGCG GTCAAGCAGG CGGTCGGCAT CCCGGTCATC
GCCGTCGGCC TGATCACCGA GCCCGAGCAG GCCGAGGCCA TCGTCGCCAC CGGCGATGCC
GACATGATCG CGCTGGCGAG GACGGTGCTT TACGATCCGC GCTGGCCCTG GCACGCGGCG
GCGAAGCTGG GCGCCAGCGT CTCGGCGCCG CCGCAATTCT GGCGCAGCCA GCCCTCGGGG
TTGCGGGACC TGTTCCGCAA GTGA
 
Protein sequence
MPQPKLFEPI AIGGQTLANR IVIAPMCMYS AEDGRMTDWH LMHLGALSHS GAAILTIEAT 
AVLPEGRISY ADVGLWDDAT EAAMDRVLKG VRAWSDMPIA IQLAHAGRKA STAKPWDGGA
QIAPDAEHGW QTVSASDLPF AEGENPPVAL DRAGLARVRD GFAEAARRAV RLGIDAIQIH
AAHGYLLHQF LSPLSNRRED EYGGSLENRM RFPLEVFEAV RDAVPQGYPV TVRISGTDWV
EGGWDIAGSI AFSQALEARG CAAIHVSSGG LDRRQQIPVG PNYQVPLARA VKQAVGIPVI
AVGLITEPEQ AEAIVATGDA DMIALARTVL YDPRWPWHAA AKLGASVSAP PQFWRSQPSG
LRDLFRK