Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_0711 |
Symbol | |
ID | 4579520 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008686 |
Strand | + |
Start bp | 692454 |
End bp | 693995 |
Gene Length | 1542 bp |
Protein Length | 513 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639768029 |
Product | histidine ammonia-lyase |
Protein accession | YP_914519 |
Protein GI | 119383463 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2986] Histidine ammonia-lyase |
TIGRFAM ID | [TIGR01225] histidine ammonia-lyase |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGTCTGAAC TGATCCTTAT CCCCGGTGAA ACCACGCTCG CGCAGCTCGA ACAGGTCTGG CGCCAGGGCC TTGCCGTGCG GCTGGCCGAC TCGGCCCGCC CCGGCATTGC CGAATCCGCC GCGCGCATTG CCGCCGCCGC CAATGGCGAG GCGCCGGTCT ATGGCGTGAA TACCGGCTTT GGCAAGCTGG CCTCGATCAA GATCGCGGCG CGGGACACCG CCACGCTGCA ACGCAACCTG ATCCTGTCGC ATTGCTGCGG CGTGGGCGAG CCGGTCGAGC CGGAAACCGT GCGGTTGATC ATGGTGCTGA AGCTTCTGTC GCTGGGCCGC GGTGCCTCGG GCGTGCGCCC CGAGGTGATC CAGCTGATCG AGGACATGCT GGCCCGCGGC GTGCTGCCGG TGATCCCCTC GCAGGGTTCG GTCGGTGCCT CGGGCGATCT GGCACCGCTG GCGCATATGG CCGCCGCCAT GCTGGGCGAG GGGCGTGCGG TCCATGAAGG CCGCGAGATG TCCTCGGCCG AGGCGCTGGC GAGCGCCGGC CTCAAGCCCG TGGTGCTGGC CGCCAAGGAG GGGCTGGCGC TGATCAACGG CACGCAGGTT TCGACCGCCT TTGCGCTGGC GGGGCTGTTC GAGGCCTTCG CCTCGGCCCG CGCGGCGCTG GTCACGTCGT CGCTTTCGAC CGATGCGATC ATGGGCTCGA CCGCGCCTTT CCTTGATGAG ATCCACACCC TGCGCGGCCA TCGCGGCCAG ATCGTCGCGG CGCGGACGAT CCGCGCGCTG ATGGACGGCT CGGAGATCCG CGAAAGCCAC CGCGAGGGCG ACAGCCGCGT GCAGGATCCG TATTGCATCC GCTGCCAGCC GCAGGTGACG GGCGCCTGCA TCGACCTGCT CTGGCAGGCC GCCCGCACGC TGGAGATCGA ATCGAACGCG GCGACCGACA ACCCGCTGGT GCTGGTCGGC GCCGACCGCA TCGTCTCGGG CGGCAACTTC CATGCCGAGC CGGTGGCCTT TGCCGCCGAC CAGATCGCGC TGGCCATCGC CGAGATCGGC GCCATTTCCC AGCGCCGCAT CGCGCTGATG GTGGACCCTG CGCTGTCGCA TGATCTGCCG CCCTTCCTGA CCCCCGATCC GGGCCTGAAC TCGGGGCTGA TGATCGCCGA AGTGACCTCG GCGGCGCTGA TGAGCGAGAA CAAGCACCTG GCGACGCCTT GCAGCACCGA CTCGACGCCG ACCTCGGCGA ACCAGGAGGA CCACGTTTCC ATGGCCGCCC ATGGCGCGCG GCGGCTGAAA CGCATGAACG CGAACCTCGC GCAGATCCTG GGCATCGAGG CGCTTTGCGC CAGCGCCGGC GTCGAGTTCC GCGCGCCGCT GGCGACCTCG GCGCCCTTGC AGGCGGTGAT CGCCGCGCTG CGCCAGACGG TGCCGGCGCT GGAGCAGGAC CGCTATCTTG CCCCCGACCT GGCCGAATCC GCCCGGCTGG TGCGTGAGGG CGTGCTGGTC GGCGCCATTC CCAGCCACCT GCTGGACGAG GTGCGGCCGT GA
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Protein sequence | MSELILIPGE TTLAQLEQVW RQGLAVRLAD SARPGIAESA ARIAAAANGE APVYGVNTGF GKLASIKIAA RDTATLQRNL ILSHCCGVGE PVEPETVRLI MVLKLLSLGR GASGVRPEVI QLIEDMLARG VLPVIPSQGS VGASGDLAPL AHMAAAMLGE GRAVHEGREM SSAEALASAG LKPVVLAAKE GLALINGTQV STAFALAGLF EAFASARAAL VTSSLSTDAI MGSTAPFLDE IHTLRGHRGQ IVAARTIRAL MDGSEIRESH REGDSRVQDP YCIRCQPQVT GACIDLLWQA ARTLEIESNA ATDNPLVLVG ADRIVSGGNF HAEPVAFAAD QIALAIAEIG AISQRRIALM VDPALSHDLP PFLTPDPGLN SGLMIAEVTS AALMSENKHL ATPCSTDSTP TSANQEDHVS MAAHGARRLK RMNANLAQIL GIEALCASAG VEFRAPLATS APLQAVIAAL RQTVPALEQD RYLAPDLAES ARLVREGVLV GAIPSHLLDE VRP
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