| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_0705 |
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| Symbol | |
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| ID | 4580646 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | + |
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| Start bp | 685120 |
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| End bp | 687270 |
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| Gene Length | 2151 bp |
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| Protein Length | 716 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 639768023 |
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| Product | lytic transglycosylase, catalytic |
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| Protein accession | YP_914513 |
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| Protein GI | 119383457 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.451183 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTATCCTT TCCGTGACAG GCTCCTGGCG CCGCTGCTGG CCCTTGCCCT AAGCCTTGCC
CAACCGGCCG GGGCCGAGGA TGCCGGGCAC CTGTCGCGTG CGCTGGCCGC GGCGGCGATG
CGCGACTGGG CGACCGCGAC GGCCGAGGCC GACGCCTCGG GTCCCATCGC CCGCGACCTG
ATCCAGTGGC AGCGGCTGCG GGCCGGGCTG GGCAGCTGGC CGGAATATCG CGACTTTGCC
GCCCGCAACC GCGACTGGCC CGGCATGGCG CTGTTCTGGA AGCGCGGCGA TGCGGTGCTG
CGCGCCGACC TGCCGCCTGC CGAGGTGATC GAATGGTTCG GCCCCCGCCG CCCCGACACG
CTGAATGGTG CCATGGCGCT GATCGCGGCC TTGCAGGCGA CCGATCCGCC GGCCGCCAAG
GCCGAGATCG CGCGCTTCTG GACCGAGCAG GCGCTGACCA AGCCCGAGGC CGACGCCTTT
CTGGCCGCGC ATGGCACCGA GGTCGCGGGG TTGCACGACG CGCGGCTGAT GCGGCTTCTG
GACCTGGGCG AATGGCAGGC GGCGCAGGTG GTGCTGCCCA TGGCCTCGGC CCCCGCGCAG
GCCCTGGGCC GCGCGCGGCT GGCGCTGCAA TCGGGGCAGG CCGGGGTGGA TACGCTGATC
CTGGCCCTGC CGGACGCGCA ACGGGGGGAT GCGGGGCTTG CGCTGGACCG TTTCCGCTGG
CGGGTCTGGG CCAAGATGCC GGAACTGGCG CGCGAGCTGA TGCTGGAACG CTCGACCAGC
GCCGAGGCGT TGCGCGACCC CGCCGCCTGG GCCGGCAAGC GCGCCGATTA CGCCCGGCTG
GCGTTGCGGC AGGGCGACTG GGCCTTGGCC GAAAGGTTGG CGGCGGGGCA TTTCCTGCCG
CCGGGCAGCG ATGCCTATTC GGATCTGGAA TGGCTTGCGG GCTACGGCGC GCTGCGCGGC
GGTGCGGCCG ACCGGGCGCT TGGGCATTTC CAGACGCTGG AAAGGGCGGT GGCGAGCCCG
ATCTCGCTGT CCCGCGCCCA TTACTGGCAG GGCCGCGCGC TGGAGGCCAA GGGCGACGGG
CCGGGCGCGG ACGCGGCCTA TGCCCGCGCC GCCGGCTATC AATCGGCCTG GTATGGGCAG
CTTGCCGCGG AAAGGCTGGG CCTGCCGATG CTGCCCGACC TGGCCGTCGC CGGGCGCAGC
GAGGCCAGCC TGCCCGACTG GCGCGGCAGC CTCTTGCGCA CCAACCCGGT CTGGCAGGCC
GGTACCTGGC TGGTCGCGGC GGGCGAGCCC GATCAGGGCG CGCGCTTCTT CCTGCACCTG
GCCGAGACCG CTGCGCCCGA GGATATCGGC CGCATGGCGC GGATGATGCT TGAGATGCGG
CTGCCCTGGC ACGCGCTGCG GCTGGCCAAG GCCGCCGCCG CCAAGGGCGC GGTCTATCCG
GCCGCCTATT TTCCGCTGAC GGGTCTTGAG AACAGCGAAC TGGGCCTGCC GCCCGAGCTG
GTCATGGCCA TCGCCCGGCG CGAAAGCGAG TTCAACCATA CCGTCTCTTC GCATGCCGGC
GCGCTGGGGC TGATGCAGGT CATGCCGGAT ACCGCGCGTT CCATGGCGCG GCGTATCGGC
GAGCCTTTCG AGCAGGCGCG GCTGACCCGC GACGCCGCCT ATAACGCGCG GCTGGGCGCG
GCCTATCTGG CAGGGCTGCG CGAACGCTTC GGCCCCTCGA TCGCGCTGGT CGCGGCGGGC
TACAATGCCG GGCCGGGCCG CTCGGCCCGC TGGCTGGGCG AGTTCGGCGA CCTGCGCGGC
GAGGTCGATC CGGTCGATTG GGTCGAGATG ATCCCCTTCG ACGAGACCCG CAACTATGTC
ATGCGGGTGG CCGAGGCGCT GCCCATCTAT CGCGCCCGCA TCAAGGGGGC GCCGGTGCCG
CTGGTGCCGA GCTGGGATCT GACGGGCGGC GGCGTGAAGC CCGCGCCTGC GCAGCCGCCG
GTCCGGCTTG CGCGTTCCGC CCGGCCGCTG ATGCCTGTGC GCACGCTGGC CGGCTATGCC
GCGGGCGGGG TGCTGGCCGA GGTCTTGGGC CCGGCCCCGG TCGAGGAGGC CAGCGCCGTG
CCGCTCAACC CTGTCCGGCC CGCTCGCGCT GGCGTGCGCG CCACCAGGTG A
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| Protein sequence | MYPFRDRLLA PLLALALSLA QPAGAEDAGH LSRALAAAAM RDWATATAEA DASGPIARDL
IQWQRLRAGL GSWPEYRDFA ARNRDWPGMA LFWKRGDAVL RADLPPAEVI EWFGPRRPDT
LNGAMALIAA LQATDPPAAK AEIARFWTEQ ALTKPEADAF LAAHGTEVAG LHDARLMRLL
DLGEWQAAQV VLPMASAPAQ ALGRARLALQ SGQAGVDTLI LALPDAQRGD AGLALDRFRW
RVWAKMPELA RELMLERSTS AEALRDPAAW AGKRADYARL ALRQGDWALA ERLAAGHFLP
PGSDAYSDLE WLAGYGALRG GAADRALGHF QTLERAVASP ISLSRAHYWQ GRALEAKGDG
PGADAAYARA AGYQSAWYGQ LAAERLGLPM LPDLAVAGRS EASLPDWRGS LLRTNPVWQA
GTWLVAAGEP DQGARFFLHL AETAAPEDIG RMARMMLEMR LPWHALRLAK AAAAKGAVYP
AAYFPLTGLE NSELGLPPEL VMAIARRESE FNHTVSSHAG ALGLMQVMPD TARSMARRIG
EPFEQARLTR DAAYNARLGA AYLAGLRERF GPSIALVAAG YNAGPGRSAR WLGEFGDLRG
EVDPVDWVEM IPFDETRNYV MRVAEALPIY RARIKGAPVP LVPSWDLTGG GVKPAPAQPP
VRLARSARPL MPVRTLAGYA AGGVLAEVLG PAPVEEASAV PLNPVRPARA GVRATR
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