Gene Pden_0682 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_0682 
Symbol 
ID4578752 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp664351 
End bp664755 
Gene Length405 bp 
Protein Length134 aa 
Translation table11 
GC content68% 
IMG OID639768000 
Product4-hydroxybenzoyl-CoA thioesterase 
Protein accessionYP_914490 
Protein GI119383434 
COG category[R] General function prediction only 
COG ID[COG0824] Predicted thioesterase 
TIGRFAM ID[TIGR00051] acyl-CoA thioester hydrolase, YbgC/YbaW family
[TIGR02799] tol-pal system-associated acyl-CoA thioesterase 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.382877 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.103995 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACCGTT TCGCGATCCG CATCTATTAC GAGGACACCG ACCTTGCCGG GATCGTCTAT 
TATGCGAATT ACCTGAAGTT CATCGAGCGC GCGCGGTCGG AATGGCTGCG CGAACTTGGC
ATCGACCAGG CGGCCTTGCA GCGTGCCGGG CTGGTCTTTG CCGTGCGCCG GGTCGAGGCC
GACTACCTGT CGCCCGCCCG TTTCGATGAC CTGTTGGCCG TCGAATCGCA GCTTCATGCG
CTGAGCCCGG CGCGGATCGT GCTGGACCAG GCGATCGTCC GCGACGGCCG GACGCTGTTC
CAGGCCCGCG TCACTCTGGC CTGCTTGACG GCTGCCGGCC GGCCCGCGCG CATCCCGGCC
GAGGTGGCGG CGCGGCTTGC GGCGGCCGAT CTCGCGGGCA ATTGA
 
Protein sequence
MHRFAIRIYY EDTDLAGIVY YANYLKFIER ARSEWLRELG IDQAALQRAG LVFAVRRVEA 
DYLSPARFDD LLAVESQLHA LSPARIVLDQ AIVRDGRTLF QARVTLACLT AAGRPARIPA
EVAARLAAAD LAGN