Gene Pden_0669 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_0669 
Symbol 
ID4578974 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp651205 
End bp652191 
Gene Length987 bp 
Protein Length328 aa 
Translation table11 
GC content69% 
IMG OID639767987 
Product3-oxoacyl-(acyl-carrier-protein) synthase 
Protein accessionYP_914477 
Protein GI119383421 
COG category[I] Lipid transport and metabolism 
COG ID[COG0332] 3-oxoacyl-[acyl-carrier-protein] synthase III 
TIGRFAM ID[TIGR00747] 3-oxoacyl-(acyl-carrier-protein) synthase III 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.13665 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.864347 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTTCGA TCAACCTCAC GATTACCGGG ACCGGCAGCT ACCTGCCTGC CACGGTGCTG 
AACTCGACCG ATATCGACGA CCGCATGGGC TGGGCGCGGG GCGAATGCGA AGCGCGTTTC
GGCATCGCCC GCCGCCATGT CGCCATGCCC GATGAGACCA GTTCGTTCAT GGGGGCCGAG
GCGGCGCGCC GCGCGATGGA GATGGCGGGC TGCGGGCCGC AGGACCTGGA CCTGATCCTT
GGCGCATGCG GGGTGATGGA GCAGCCGATC CCCTCGACCG CGACGCTGGT GCAGGACCGC
CTGGGGCTGG GTCGTTCGGG GATCGCGGCG TTCGACGTGA ATGCGACCTG CCTCAGCTTC
CTTCAGGCGC TGGACCTTGC GGCCCTGCAT GTCCAATGCG GCCGGGTGCG GCGGGCGCTG
GTGTTTTCGT CGGACATCGC ATCGGTCGGG CTGGACTGGA ATCGGCCCGA GGCTGCCGCG
ATCTTTGGCG ACGGCGCTGC GGCGGTGGTC GTCGAGGCGG GGGGCAAGGG CGCGGTGCTG
GCGCATGATT TCCAGACCTA TGCCCATGGC CATGACGCCT GCGTGCTGGC GGCTGGCGGA
ACGCGCGTCA ATCCGGCGCG CGGCATCGCC CCGGGCGAGG ACCGCTTTCG CATGGACGGC
GGCAAGGCGT TCAAGCTCGC CTCACGCTAT CTGCCGCGCT TTCTGCAAAG ACTGCTGCAA
AAGGCCGGGG TGGGGCTGGC GGGCATCGGC TGCATCATTC CGCATCAGGC CAGTGCGCAG
GCCCTGCAGC ACGCGGCCCG CAACCTGTGG CTGCCGCCCG GCCGCGTGAT CGACATCTTT
GCCCGCACCG GCAACCAGAT CGCCGCCTCG ATCCCGACGG CGCTGGATCA TGCGGTGCGC
TCGGGGCGGC TGGTGCGCGG GGACGTCGCG CTGCTGATGG GCACCTCGGC CGGGATTTCG
GTCGGCGGTA TGATGGTGCG GTTCTGA
 
Protein sequence
MPSINLTITG TGSYLPATVL NSTDIDDRMG WARGECEARF GIARRHVAMP DETSSFMGAE 
AARRAMEMAG CGPQDLDLIL GACGVMEQPI PSTATLVQDR LGLGRSGIAA FDVNATCLSF
LQALDLAALH VQCGRVRRAL VFSSDIASVG LDWNRPEAAA IFGDGAAAVV VEAGGKGAVL
AHDFQTYAHG HDACVLAAGG TRVNPARGIA PGEDRFRMDG GKAFKLASRY LPRFLQRLLQ
KAGVGLAGIG CIIPHQASAQ ALQHAARNLW LPPGRVIDIF ARTGNQIAAS IPTALDHAVR
SGRLVRGDVA LLMGTSAGIS VGGMMVRF