Gene Pden_0660 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_0660 
Symbol 
ID4578965 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp638639 
End bp640381 
Gene Length1743 bp 
Protein Length580 aa 
Translation table11 
GC content67% 
IMG OID639767978 
Productgamma-glutamyltransferase 
Protein accessionYP_914468 
Protein GI119383412 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0405] Gamma-glutamyltransferase 
TIGRFAM ID[TIGR00066] gamma-glutamyltranspeptidase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGATC GAATCGTCGG GATGGGCCGT GCGGCGGCCA TCGTGTTGGC GGCAGGCTGC 
ATCGGGGTTC CAGCCGCGGC GCAGGACGCC GCGATCTTCG ATGTGATGGA CCGGATTCAT
CCGGTCTGGG CGGAAAGCGG CATGGTCTCG GCACAGGAGC GCCTGGCCGC CGAGATCGGC
CGCGACATCA TGGCCAGGGG CGGCAACGCG GTCGATGCCG GCGTGGCGGT GGCCTTTGCG
CTGGCCGTCA CCCTGCCGCG CGCCGGCAAT ATCGGCGGCG GCGGCTTCAT GCTGGTGCAT
GATGCCGAAA CCGGCCAGAC CCACGCCATC GACTATCGCG AAATGGCGCC TCGGGGCGCC
TCGCGCGACA TGTTCCTGGA TGCGAAGGGC GAGGCCGACA GCGAGAAGTC GCTTTACAGC
GGCGCGGCCT CGGGAGTGCC GGGGACCGTG GCGGGAATGA AGCTGGCGCT GGACAGATAT
GGCAGCATGG ACTGGGCCGA GGTCATCGCC CCGGCGATCC GGCTGGCCGA GGAGGGCATC
ACCGTCACCC CGGAACTGGC CGACAGCATC GAGGCCGAGC GCGAGCATCT GGAGAAATTC
CCGTCGAGTG CGAAGATCTT CTTCAAGGAG GGCGGGGCGG CCTATCGGCC CGGCGACAGG
CTGGTGCAGG CCGATCTGGC GGCGACGCTG AAGAAGATCG CCGCCGAGGG ACCGGACGGC
TTCTACAAGG GCGAGGTGGC CGAGGCCATC GCGCGTTCGG TGCAGGAAGC GGGCGGGCTG
ATCACCGTCG AGGACATGGC GGCCTACCAG CCCATCCTGC GCGAGCCGGT GCGCGGCACC
TATCGCGGCC ATGAGGTGGT CTCGATGCCG CCGCCCTCAT CGGGAGGGGT GCACCTGATC
CAGATCCTGA ATGCGCTGGA GGGCTATCCG ATCGGTGCGC TGGGGCAGAA CTCGGGCGAG
ACCATCCACC TGATGGCCGA GGCGATGAAG CTGGCCTATG CCGACCGCTC GGAATATCTG
GGCGACCCGG ATTTCGTCGA TGTGCCTGTC GCCGCGCTGA CCGGCAAGGA TTACGCGGTC
GAGATGCGCC GCAAGATCAG CGCCGATTTC GCCACGCCCT CGGTGATGAT CAAGCCGGCG
GACCTTGCGC CTTACGAATC CGACCAGACC ACGCATTTCT CGGTGGTGGA CAAGGACGGC
AGCGCGGTCT CGAACACCTA TACCATCAAC CTGAACTATG GCTCGGGGCT GGTGGCCGAG
GGCACGGGCG TCCTGATGAA CAACGAGATG GACGATTTCT CGGCCAAGCC CGGCGTGCCC
AATGCCTTCG GCCTGGTCGG CGGCGATGCC AATGCGGTCG AGCCGGGCAA GCGGCCGCTT
TCGTCGATGA CGCCGACCAT GGTGCTGAAG GACGGCAAGG TCTGGCTGGT CACCGGCTCT
CCCGGCGGTG CGCGCATCAT CACCACGGTG TTGCAGGTGA TCATGAACAT GATCGACCAC
GGCATGAACG TGGCCGAAGC CTCGACCGCG CCACGCATCC ATCACCAGTG GCTGCCCGAC
GAATTGCGCG TGGAAGAGGG CATCAGCCTG GACACCATAC GCATCCTTCA GGCCAAGGGG
CACGGCGTCG CGGTCAAGGA GGCGATGGGC TCGACCCAGT CGATCATGCG CGACCCGGCG
ACGGGGACGC TTTACGGCGC CTCGGACCCG CGCCGGCCGG ATGCGGCGAC GCTGGGCTAC
TGA
 
Protein sequence
MKDRIVGMGR AAAIVLAAGC IGVPAAAQDA AIFDVMDRIH PVWAESGMVS AQERLAAEIG 
RDIMARGGNA VDAGVAVAFA LAVTLPRAGN IGGGGFMLVH DAETGQTHAI DYREMAPRGA
SRDMFLDAKG EADSEKSLYS GAASGVPGTV AGMKLALDRY GSMDWAEVIA PAIRLAEEGI
TVTPELADSI EAEREHLEKF PSSAKIFFKE GGAAYRPGDR LVQADLAATL KKIAAEGPDG
FYKGEVAEAI ARSVQEAGGL ITVEDMAAYQ PILREPVRGT YRGHEVVSMP PPSSGGVHLI
QILNALEGYP IGALGQNSGE TIHLMAEAMK LAYADRSEYL GDPDFVDVPV AALTGKDYAV
EMRRKISADF ATPSVMIKPA DLAPYESDQT THFSVVDKDG SAVSNTYTIN LNYGSGLVAE
GTGVLMNNEM DDFSAKPGVP NAFGLVGGDA NAVEPGKRPL SSMTPTMVLK DGKVWLVTGS
PGGARIITTV LQVIMNMIDH GMNVAEASTA PRIHHQWLPD ELRVEEGISL DTIRILQAKG
HGVAVKEAMG STQSIMRDPA TGTLYGASDP RRPDAATLGY