| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_0655 |
|---|
| Symbol | |
|---|
| ID | 4578960 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Paracoccus denitrificans PD1222 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008686 |
|---|
| Strand | + |
|---|
| Start bp | 632113 |
|---|
| End bp | 633768 |
|---|
| Gene Length | 1656 bp |
|---|
| Protein Length | 551 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639767973 |
|---|
| Product | nitrite/sulfite reductase hemoprotein beta subunit |
|---|
| Protein accession | YP_914463 |
|---|
| Protein GI | 119383407 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0155] Sulfite reductase, beta subunit (hemoprotein) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTTGACG CGCGTCCCCA GCACAACGAA TATCTGCGCC ACCGCGCCCA GCAGTTCCGC
CAGCAGGTCG AGCGCCGGCT GGACGGCAGC CTGACCGAGG ACGAGTTCCG TCCGCTGCGC
CTGATGAACG GCGTCTATCT GCAACTGCAT GCCTATATGC TGCGGGTGGC CATTCCCTAT
GGCACCATCA GCCCCGACCA GATGCGCACC CTGGCGCTTC TGGCCGAGAA ATGGGACAAG
GGCTACGGCC ATTGGACCAC GCGGCAGAAC ATCCAGTACA ACTGGCCGAA GCTGGTCGAT
ATCCCCGACA TGCTGGATGC GCTGGCCGAT GTCGGCCTGC ACGCCATCCA GACCTCGGGC
AACACGATCC GCAACGTGAC GACGGACGCC TTTGCTGGCG CCGCCGCCGA CGAGGTCGCC
GATCCGCGTC CCTATGCCGA ATTGCTGCGG CAATGGTCCA CCGACCACGG CGAATTCCAG
TTCCTGCCGC GCAAGTTCAA GATCGCCGTC TCGGGCGGCA AGAAGGACCG CGCCGTCATC
GCTGCCCATG ACATCGGCCT GCGGCTGGTT GGGAACGACA AGGGCGAGCT GGGCTATCAG
GTCTGGATCG GCGGCGGGTT GGGCCGCACG CCGCTTCTGG GCCAGGTGGT GCGCGAGTTC
CTGCCCGAGG CCGACCTGCT GCCCTATGTC GAGGCGATCA TCGCGGCCTA CAACCTCTCG
GGCCGCCGCG ACAACAAGTA CAAGGCCCGC ATCAAGATCA CCGTGGCCGA GCGTGGCCTC
GACGTGATGC GCGAGGAGAT CGAGGCCGAG TTCCTGCGTC GCCGCGAAGC CTTTACCGGC
GTCGACCAGG ACCTGCTGGC GGCGCTGAAA AGCCTCTACG CCCCGCCCGC CTTCCGCAAC
GAGCCCGAGG GCGACTACGA ACAGCGCCGC GCCGCCGACC CGGTCTTCCG TAGCTGGACC
GACACCAACC TGTCGGCCCA CAAGCAAGAG GGCTATGCCA GCGTCACCGT GACCTTCAAG
GCGCCGGGCC AGACGCCGGG CGATGCCTCG GCGGAACAGA TGCGCCTGCT GGCCGACCTG
GCCGAGCGTT TCGGCCATCA CGACCTGCGC ATCAGCCACG AGCAGAACGT GGTGCTGCCG
CATGTCCACA AGTCCGACCT GTTCGCGGTC TATCAGGAGC TGAAGGCCGC CGGCCTCGCC
ACCGCGAATG CGGGCCTGAT CAGCGATATC GTCGCTTGCC CGGGCATGGA CTATTGCACG
CTGGCCACCG CCCGCTCGAT CCCGATCGCC CAGGACATCG CGGCGCATTT CCGCGCCCGC
GGCCTCGAGG AAGAGATCGG CCAGTTCAAC ATCCGCATCT CGGGCTGCAT CAACGCCTGC
GGCCACCACC ACCTGGGCCA TATCGGCATC CTGGGCCTGG ACCGTGCGGG GGTCGAGAAC
TACCAGATCA CGCTGGGCGG CGACGGCTAC GACATCCCGG CCATCGGCCA GCGCGCCGGT
GCGGGCTTCC CGGCCGAAGA GGTCGTGCCG GCCATCGACC GGCTGATCGA TGCCTATCTG
GAACTGCGCG AATCGCCCGA GGAGCGCTTC ATCGACGCCT ATCGCCGTCT GGGAGTGGCT
CCGTTCAAGG CGGCGCTGTA TCCGGCCGAT GCTTGA
|
|---|
| Protein sequence | MFDARPQHNE YLRHRAQQFR QQVERRLDGS LTEDEFRPLR LMNGVYLQLH AYMLRVAIPY
GTISPDQMRT LALLAEKWDK GYGHWTTRQN IQYNWPKLVD IPDMLDALAD VGLHAIQTSG
NTIRNVTTDA FAGAAADEVA DPRPYAELLR QWSTDHGEFQ FLPRKFKIAV SGGKKDRAVI
AAHDIGLRLV GNDKGELGYQ VWIGGGLGRT PLLGQVVREF LPEADLLPYV EAIIAAYNLS
GRRDNKYKAR IKITVAERGL DVMREEIEAE FLRRREAFTG VDQDLLAALK SLYAPPAFRN
EPEGDYEQRR AADPVFRSWT DTNLSAHKQE GYASVTVTFK APGQTPGDAS AEQMRLLADL
AERFGHHDLR ISHEQNVVLP HVHKSDLFAV YQELKAAGLA TANAGLISDI VACPGMDYCT
LATARSIPIA QDIAAHFRAR GLEEEIGQFN IRISGCINAC GHHHLGHIGI LGLDRAGVEN
YQITLGGDGY DIPAIGQRAG AGFPAEEVVP AIDRLIDAYL ELRESPEERF IDAYRRLGVA
PFKAALYPAD A
|
|---|
| |