Gene Pden_0638 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_0638 
Symbol 
ID4580249 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp615033 
End bp616142 
Gene Length1110 bp 
Protein Length369 aa 
Translation table11 
GC content72% 
IMG OID639767956 
Producthypothetical protein 
Protein accessionYP_914446 
Protein GI119383390 
COG category[S] Function unknown 
COG ID[COG3768] Predicted membrane protein 
TIGRFAM ID[TIGR01620] conserved hypothetical protein, TIGR01620 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.205162 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.567566 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGAAC CTCCGAAACG GCGCGGGCCG GTGCTGATGG AAATGGGCGC GGAACCCCAG 
GCGCCGCGCT CCGAGCCCAT GCCGGAGCCC CGCACCGACC AGCGCGACCG CAAGGCGCCG
CGGGCCGAGT GGCGAGAGGG CGAACCCGCG CCCTCGCCCG CCGATGCGCC GATGATCGAC
GACGGGCTGG CCCCGCCGCT GCCGCAACCG CGCACCATGC AGCTTGTCGC GCGGCTGGTC
GGGCGCGGGC CGTCGCGGCT GACGCGCTTC TTCATCAATA CCGGCGTGGC GCTGTTCACC
TTCCTTTTGT CGGTGGCGGC GCTGCGATAT CTGACGGATC TGCTGAACAG CTATCCGCTG
CTCGGCTGGA TCGGCATCGC GCTGATGGTG CTGTTCTGCA TCGCGGCGCT GGGGATGGCC
TGGCGCGAAT ACCGCGCCTG GTCGCGCTTT GCCGCCATCG ACGGCATCAA CCGCGATGCC
GGGGCGGCGC TGGCATCGGG CGACCTGAAG GCGGCGCAGC ATGTGGTCGG GCGGATGGAG
AGCCTTTACC GCGCCCGGCC GGAGCTGGAA TGGGGCCTGA CCCGGCTGCG CGAGCGCAAG
GGCGACGCCT ATGATGCCCA GACGCTGATC GCGCTGGCCG AGACCGAGTT GCTGGCGGCC
CTGGACCAGC AGGCCCGGCG CGAGATCGAG GCCGCCGCCC GCACCGTCGC CGCCGCCACC
GCACTGATCC CGCTGGCGCT GGCCGATGTG ATCGCGGCCC TGGCGGCGAA CCTGCGGATG
ATCCGCCGCA TGGCCGAGAT CTATGGCGGC CGCGCCGGCG CCGTGGGCGG CTGGCGGCTG
GCGCGCACGG TGATGACGCA TCTGATCGCC ACCGGCGCGG TCGCGGCCGG GGACGACCTG
ATCCACACCG TCGCCGGGGG CGGGCTGCTG GCCAAGGTCT CGAAGCGCTT CGGCGAGGGT
GTTGTGAACG GCGCGCTGAC CGCCCGGGTC GGCATCGCGG CGATGGAGGT CTGCCGGCCC
CTGCCCTTCA TCCATCAGCC CCGGCCCAAG GTCGGCAACC TGATCGCCCG CGGGTTGAAG
GGGCTGTTCG GCGAGGACGA GGCGAAGTAG
 
Protein sequence
MAEPPKRRGP VLMEMGAEPQ APRSEPMPEP RTDQRDRKAP RAEWREGEPA PSPADAPMID 
DGLAPPLPQP RTMQLVARLV GRGPSRLTRF FINTGVALFT FLLSVAALRY LTDLLNSYPL
LGWIGIALMV LFCIAALGMA WREYRAWSRF AAIDGINRDA GAALASGDLK AAQHVVGRME
SLYRARPELE WGLTRLRERK GDAYDAQTLI ALAETELLAA LDQQARREIE AAARTVAAAT
ALIPLALADV IAALAANLRM IRRMAEIYGG RAGAVGGWRL ARTVMTHLIA TGAVAAGDDL
IHTVAGGGLL AKVSKRFGEG VVNGALTARV GIAAMEVCRP LPFIHQPRPK VGNLIARGLK
GLFGEDEAK