Gene Pden_0636 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_0636 
Symbol 
ID4580247 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp612399 
End bp612830 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content72% 
IMG OID639767954 
Productpeptidyl-tRNA hydrolase domain protein 
Protein accessionYP_914444 
Protein GI119383388 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1186] Protein chain release factor B 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.00765778 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.516786 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCGCA TCAACGACCA GATCGCCATC GAGGAATGGG AACTGTCCGA ACAGTTCACC 
CGGTCCCAGG GACCGGGCGG GCAGAACGTG AACAAGGTCG AGACGGCGGT CGAGCTGCGC
TTCGAGGCCG AGCGTTCGCC GCATCTGGCC CCGCCGGTCA AGGCGCGGCT GAAGCGGCTG
GCCGGGCGGC GCTGGACACA GGACGGCGCC GTGCTGATCC GGGCCGAGGA AACCCGCAGC
CAGGCCCGCA ACCGCGAGTT GGCGCGCGAA CGGCTGGCCG AACTGATCCG CCAGGCGCTG
GTGGCGCCGC GCAAGCGCAT CCCGACCCGT CCGACGCTGG GCAGCCAGCG CCGCCGGCTG
GCCGCCAAGA CCCAGCGCGG CGAGGTCAAG GCGACGCGTG GCCGCATCCG CGATGCGGAG
GACCCGGCAT GA
 
Protein sequence
MLRINDQIAI EEWELSEQFT RSQGPGGQNV NKVETAVELR FEAERSPHLA PPVKARLKRL 
AGRRWTQDGA VLIRAEETRS QARNRELARE RLAELIRQAL VAPRKRIPTR PTLGSQRRRL
AAKTQRGEVK ATRGRIRDAE DPA