| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_0610 |
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| Symbol | |
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| ID | 4579654 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | + |
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| Start bp | 586652 |
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| End bp | 587821 |
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| Gene Length | 1170 bp |
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| Protein Length | 389 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639767928 |
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| Product | amidohydrolase |
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| Protein accession | YP_914418 |
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| Protein GI | 119383362 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1473] Metal-dependent amidase/aminoacylase/carboxypeptidase |
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| TIGRFAM ID | [TIGR01891] amidohydrolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.00962709 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.632979 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGTCA AGAACCGCTT TGCCGAATTG CTGCCCGAGA TCACCGCCTG GCGCCGCGAC
TTCCACGAGA ATCCCGAGCT CGACTATCAG GTCCACCGCA CCGCCGGCCG CGTGGCCGAG
CTGCTGCGCG GCTTCGGCGT GGACGAGGTG AACGAGGGCG TCGGCCGCAC CGGCGTGGTG
GGCGTCATCA GGGGCCGCAG CAACAGCAGC GGCCGGGTGA TCGGGCTGCG TGCCGACATG
GATGCGCTGC CGATCAACGA GCAGACCGGG GCGGAATATG CCTCGAAAAA TCCGGGGGTC
ATGCATGCCT GCGGCCATGA CGGCCATACC GCCATGCTGC TGGGCGCGGC GAAATACCTG
GCCGAGACGC GCAATTTCGA CGGCACCGCC GTGGTGATCT TCCAGCCCGC CGAAGAGGGC
GGGGCAGGCG GCCTGGCCAT GGTGCAGGAC GGTTTGGTGG ATCGCTGGGG CATCCAGGAA
TTCTATGGCA TGCACAATAT GCCCGGCTAT CCGACCGGCA GTTTTGCCAT CCGCGAGGGT
GCCATGATGG CCGCCGCCGA CCAGTTCGAC ATCGTGGTCA CCGGCAAGGG CGGGCACGCC
GCCAAGCCGC ATGAGGCGAT CGACACCACC TTGGTCGCGG CGCAGATCAT CGTGGCGCTG
CAATCCATCG TGGCGCGCAA TGTTGATCCG CTGAAAAGCG GCGTGATCTC GGTCTGCGTG
GTGCAGACCG ATTCCACCGC GCATAACGTC ATCCCTCAGG TGGTGAAGCT GAAGGGCACC
GCCCGCAGCC TTGCCCCCGA GGTGCGCGAC CAGCTGGAAG AGGGCATCAA GCGCGTCGCC
ACCCATACCG CCGCGGCCTT CGGCGCCGCG GCCGAGGTGA CATACGACCG CGGCTATCCG
GTGACGATGA ACCACCCCGA AGCAACCGGG TTCGCGGCCG AGGTGGCGCG CCAGGTGGCG
GGCGAGGTGA ACATGGAGAT GGAGCCGCTG ATGGCGGGCG AGGATTTCAG CTATATGCTG
AACGAACGTC CCGGCGCCTA TATCTTCGTC GGCAATGGCG ACACCGCCAT GGTGCATCAC
CCCGCCTATG ATTTCGACGA CAATGCGATT CCGGCCGGGT CGAGCTGGTA TGCCGGCATG
GTCGAGGCGC GGATGCCGAT CCTGGCGTGA
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| Protein sequence | MPVKNRFAEL LPEITAWRRD FHENPELDYQ VHRTAGRVAE LLRGFGVDEV NEGVGRTGVV
GVIRGRSNSS GRVIGLRADM DALPINEQTG AEYASKNPGV MHACGHDGHT AMLLGAAKYL
AETRNFDGTA VVIFQPAEEG GAGGLAMVQD GLVDRWGIQE FYGMHNMPGY PTGSFAIREG
AMMAAADQFD IVVTGKGGHA AKPHEAIDTT LVAAQIIVAL QSIVARNVDP LKSGVISVCV
VQTDSTAHNV IPQVVKLKGT ARSLAPEVRD QLEEGIKRVA THTAAAFGAA AEVTYDRGYP
VTMNHPEATG FAAEVARQVA GEVNMEMEPL MAGEDFSYML NERPGAYIFV GNGDTAMVHH
PAYDFDDNAI PAGSSWYAGM VEARMPILA
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