Gene Pden_0594 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_0594 
Symbol 
ID4579638 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp568349 
End bp569500 
Gene Length1152 bp 
Protein Length383 aa 
Translation table11 
GC content72% 
IMG OID639767912 
ProductFmu (Sun) domain-containing protein 
Protein accessionYP_914402 
Protein GI119383346 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0144] tRNA and rRNA cytosine-C5-methylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCCCG CCGCCCGTGC CGCCGCGGCC ATCGACATTC TTGACCGCAT TCTCGACGGG 
CAGGCCGCCG AAGCGGCGCT GATCCGCTGG GCACGGGCCA GCCGCTTTGC CGGCTCCGGC
GACCGCGCGG CGGTGCGGGA CCTGGTCTTC GACGCCTTGC GCCGATTGCG TTCGCGTGCC
GCCCTGGGCG GCGCGCTCTC CGGGCGCGGG CTGCTGCTGG GCATGTGCCG CGAAGAGGGG
ATCGACCCCG CAACCCTGTT CACCGGTGAA GGGCACGCGC CCTCGGTGCT TTCCGAGGGC
GAGGGTCAGG CTGGCCGTGC GCCCACGCCG GACGAGGCGC TGGATCTGCC CGACTGGCTC
TTGCCGCTTT GGCGCAAGGC GCTTGGCGGG GATGCCGAGC CCGTGGCACT GGCCATGCGG
GATCGCGCGC CGGTCTGGCT GCGCGTCAAC CTGCGCCGTG CCGATCCGGC CCGTGCCGCC
GCCGCGATGG CCGAGCAGGG GATCGCCACC GCACCCCATC CCGATTTGCC GACGGCCCTG
CGCATCACCG AGGGCGCCCG GCGGCTGGCC GGCTGCCATG CCTATCGCGA GGGGCTGGTC
GAATTGCAGG ATCTTTCGCC CCAGATGGCC TGCGCGCTGC TGCCGGCGCA AGGCAGCCTG
CTGGATTTCT GCGCCGGTGG CGGCGGCAAG GCGCTGGCGC TTGCCGCGCA GGGTGCGGGG
CCGGTCACCG CGCATGACAT CGATGCGGGG CGCATGGCCG ATCTGCCCGC ACGCGCCGAA
AGGGCAGGGG TGCGCATCCG TCTTGCGGCG CCGGGCAAGG TTGCGGGCCG GTTCGATACG
GTCGTTGCCG ACGTGCCCTG TTCGGGCAGC GGAACCTGGC GGCGCGGCCC GGATGCGAAA
TGGCGCCTGA CGCGCGACGA TCTGGAGCAG CTTGCGGCCC GGCAGTGCCG GATTCTGGAT
CAGGCGGCGG GGTTCGTCGC CGATGGCGGG CATCTGGCCT ATATGACCTG CTCGGTCCTG
GATGCCGAGA ACGACGATCA GGTGCAAGGT TTTCTGGCGC GAAACCGGCG GTTCGAGCAG
GTCCTGGCGC GGCGTTTTAC ACCGCTGACC GCCTCGGACG GCTTTTATCT GGCCCTGATG
CGCCGCCGTT AA
 
Protein sequence
MTPAARAAAA IDILDRILDG QAAEAALIRW ARASRFAGSG DRAAVRDLVF DALRRLRSRA 
ALGGALSGRG LLLGMCREEG IDPATLFTGE GHAPSVLSEG EGQAGRAPTP DEALDLPDWL
LPLWRKALGG DAEPVALAMR DRAPVWLRVN LRRADPARAA AAMAEQGIAT APHPDLPTAL
RITEGARRLA GCHAYREGLV ELQDLSPQMA CALLPAQGSL LDFCAGGGGK ALALAAQGAG
PVTAHDIDAG RMADLPARAE RAGVRIRLAA PGKVAGRFDT VVADVPCSGS GTWRRGPDAK
WRLTRDDLEQ LAARQCRILD QAAGFVADGG HLAYMTCSVL DAENDDQVQG FLARNRRFEQ
VLARRFTPLT ASDGFYLALM RRR