| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_0576 |
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| Symbol | gatA |
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| ID | 4579620 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | + |
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| Start bp | 547754 |
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| End bp | 549235 |
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| Gene Length | 1482 bp |
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| Protein Length | 493 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639767894 |
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| Product | aspartyl/glutamyl-tRNA amidotransferase subunit A |
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| Protein accession | YP_914384 |
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| Protein GI | 119383328 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
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| TIGRFAM ID | [TIGR00132] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0114486 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.330784 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGACC TGAACAAACT GACCATCGCC GCAGCCCGCG ACGGGCTGCG CAAGGGCGAT
TTCACCAGCG CTGAACTGAC CGAGACCTGC CTGGTCGCCA TCGAGGCTGC CGGTGCGCTG
AACGCCTGGT GCCACAAGAC CCCGGAAAAG GCGCGCGAGA TGGCGGCCGC GGCCGACAAG
CGCATCGCCG CGGGTGACGC GCCCGCCATG TGCGGCATTC CGCTGGGCAT CAAGGATCTG
TTCTGCACCC GCGACGTGCC GTCGCAGGCG GCCAGCCGCA TTCTCGACGG TTTCCTGCCG
CAATATGAAT CGACCGTGAC CCAGAACCTG TGGGATGCGG GCGCGGTGAT GCTGGGCAAG
CTCAGCATGG ACGAATTCGC CATGGGTTCG TCGAACGAAA GCGCCTGCTA TGGCCCGGTG
GTCAATCCGT GGAAGGTAGA CGACCGGCAG TTGACGCCTG GCGGATCCTC GGGCGGCTCG
GCGGCGGCGG TGGCGGCCGA CCTGTGCCTG GCCGCGACCG GCACGGATAC CGGCGGCTCG
ATCCGCCAGC CGGCGGCCTT TACCGGCACG GTCGGGCTGA AGCCGACCTA TGGCCGGGTC
AGCCGCTGGG GCGTGATCGC ATTCGCCAGC TCGCTGGATC AGGCCGGGCC GATGACCAAG
ACGGTGCGCG ACGCGGCGAT CATGCTGGGC GCCATGGCCT CGGTCGATGC CAAGGATTCG
ACCAGCGCCG AGCGCGCGGT GCCGGATTAC GAGGCGGCGC TGACCGGCGA CATTCGCGGC
CGTCGCATCG GCATTCCGCG CGAATACCGC ATGGAGGGCA TGTCGGACGA GATCGACGCG
CTTTGGCACA AGGCGGCCGA GATGCTGCGC GACGCCGGCG CCGAGGTGGT GGACATCACC
CTGCCGCATA CGAAATACGC GCTGCCGGCC TATTACGTCA TCGCGCCGGC CGAGGCTTCC
TCGAACCTCG CGCGCTATGA CGGGGTGCGC TATGGCCGCC GCGCCAGGCT GGGGGCGGGT
GACGGCGTGG TCGAGATGTA TGAAAAGACC CGTGCCGAGG GTTTCGGCCC CGAGGTGCAG
CGCCGGGTGA TGATCGGAAC CTATGTGCTG TCGGCGGGCT TTTACGACGC CTATTACAAC
CGTGCCCGCA AGGTCCGCGC GCTGATCAAG CGCGACTTCG ACCAGGTCTT TGCCGACGGT
ATCGACGCCA TCCTGACGCC CGCCACCCCC AGCGCAGCCT TTGGCCTGGG AGAGATGTCG
GGCAAGGATC CGGTCGAGAT GTATCTCAAC GACGTCTTTA CCGTCACGGT GAACCTGGCT
GGGTTGCCGG GGATTTCGGT GCCGGTGGGG CTGGACCGCC AAGGTCTGCC GCTGGGCATG
CAGCTGATCG GCCGTCCCTG GGACGAAGGC GGGCTCTTGA ACCTTGCGCA AAGCCTCGAA
TCTGCGGCAG GGTTTACGGC GAAACCCTCG CGCTGGTGGT AA
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| Protein sequence | MSDLNKLTIA AARDGLRKGD FTSAELTETC LVAIEAAGAL NAWCHKTPEK AREMAAAADK
RIAAGDAPAM CGIPLGIKDL FCTRDVPSQA ASRILDGFLP QYESTVTQNL WDAGAVMLGK
LSMDEFAMGS SNESACYGPV VNPWKVDDRQ LTPGGSSGGS AAAVAADLCL AATGTDTGGS
IRQPAAFTGT VGLKPTYGRV SRWGVIAFAS SLDQAGPMTK TVRDAAIMLG AMASVDAKDS
TSAERAVPDY EAALTGDIRG RRIGIPREYR MEGMSDEIDA LWHKAAEMLR DAGAEVVDIT
LPHTKYALPA YYVIAPAEAS SNLARYDGVR YGRRARLGAG DGVVEMYEKT RAEGFGPEVQ
RRVMIGTYVL SAGFYDAYYN RARKVRALIK RDFDQVFADG IDAILTPATP SAAFGLGEMS
GKDPVEMYLN DVFTVTVNLA GLPGISVPVG LDRQGLPLGM QLIGRPWDEG GLLNLAQSLE
SAAGFTAKPS RWW
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