| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_0573 |
|---|
| Symbol | |
|---|
| ID | 4579617 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Paracoccus denitrificans PD1222 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008686 |
|---|
| Strand | + |
|---|
| Start bp | 545816 |
|---|
| End bp | 546649 |
|---|
| Gene Length | 834 bp |
|---|
| Protein Length | 277 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 639767891 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_914381 |
|---|
| Protein GI | 119383325 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3665] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.329017 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.178207 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCGCA TCATTCCCGA AGACGCCGTC GAACGCCGGG CTGTCCGCCC GGTCATCTGC
TATCTGAACG AGACGCTGCC CGACCCGGAC CTGCCGGGTT TGCAGGCGTT GCGGCTGACC
GCCCGCAAGT CCGGCGAATG CCTGGTCCCG CCGCGCGAGG CGCGCTGCTT TCACGTTCCG
GCTGGGCATT TCTTTCGCAT CACCAGCGTC GAGGGACCGC AGGTTGGCGA CCTGAACCTG
TGGTCCGCTG CCGATCCGCG CGAGCGGTTC TATTCCGGCA AGACCCGGGC ATTGCACGGC
ACGCATCTGA CGCGCGGCGA CCGCATGTGG TCGAGCTTTC CCAACCTGCG CCCGATGGCC
ACGGTGACCG AGGACACGCT GGAATGGTAT GGCATCGATG AATACGGCGG CTCGGTCCAT
GACGTCATCG GGACGCGCTG CGATCCCTAT ACGCATCGCC TGCTGAGCGG GCAGGACTAT
CACCATTGCT GCCATTCCAA CCTGACCAAT GCGCTGATGG CGGAACTGAG CCTTGCCCGA
GATGAGGCAG AGCCCTTGGT GCATGACGTG CTGAACGTCT TCATGTGCAC CGGCTTCACC
CGCGATTCCG GGCAGTATTT CATGAAGGCG AGCCCGGTGC GCCCGGGCGA CTACATCGAA
TTCTTCGCCG AGATCGACCT GATCGGCGGG CTCTCGGCCT GTCCGGGCGG CGATTGCGGC
AGCGCGCATT CCAGCGACGC CGCCGCCTGC CACCCGCTGC TGGTCGAGAT ATTCGCGCCG
GCCCGGTCCG CGGCGCGTGC GCAGCCGGGG CCGAGCGCCT ATCGCTGGCC CTAG
|
|---|
| Protein sequence | MTRIIPEDAV ERRAVRPVIC YLNETLPDPD LPGLQALRLT ARKSGECLVP PREARCFHVP
AGHFFRITSV EGPQVGDLNL WSAADPRERF YSGKTRALHG THLTRGDRMW SSFPNLRPMA
TVTEDTLEWY GIDEYGGSVH DVIGTRCDPY THRLLSGQDY HHCCHSNLTN ALMAELSLAR
DEAEPLVHDV LNVFMCTGFT RDSGQYFMKA SPVRPGDYIE FFAEIDLIGG LSACPGGDCG
SAHSSDAAAC HPLLVEIFAP ARSAARAQPG PSAYRWP
|
|---|
| |