| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_0569 |
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| Symbol | sdhA |
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| ID | 4579690 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | + |
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| Start bp | 541965 |
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| End bp | 543767 |
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| Gene Length | 1803 bp |
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| Protein Length | 600 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639767887 |
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| Product | succinate dehydrogenase flavoprotein subunit |
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| Protein accession | YP_914377 |
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| Protein GI | 119383321 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
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| TIGRFAM ID | [TIGR01812] succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup
[TIGR01816] succinate dehydrogenase, flavoprotein subunit, E. coli/mitochondrial subgroup |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.508772 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.102225 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGCTT ACAAATACGA AACGCACGAA TATGACGTCG TGGTCGTCGG TGCCGGTGGC
GCGGGCCTGC GCGCGACGCT GGGCATGGCC GAACAGGGGT TGCGCACCGC CTGCGTGACC
AAGGTTTTCC CGACCCGTTC GCACACGGTC GCGGCGCAGG GCGGCATCGC CGCCTCGCTG
TCGAACATGG GCCCGGACAA CTGGCAGTGG CACATGTATG ACACCGTCAA GGGCTCGGAC
TGGCTGGGCG ACACCGACGC CATGGAATAC CTGGCGCGCG AGGCCCCCAA GGCGGTCTAT
GAGCTGGAGC ATTACGGCGT GCCCTTCTCG CGCACCGAGG AAGGCAAGAT CTATCAGCGC
CCCTTCGGCG GCCACACCAC CGAGTTCGGC GAAGGCCCGC CGGTGCAGCG CACCTGCGCC
GCCGCCGACC GCACCGGCCA CGCGATCCTG CACACGCTCT ATGGCCAGTC GCTGAAGGAA
AAGGCCGAGT TCTTCATCGA ATATTTCGCG CTGGACCTGA TCATCACCGA TGGCGCCTGC
ACCGGCGTGG TGTGCTGGAA GCTGGACGAC GGCACAATCC ACGTCTTCAA CGCCAAGATG
GTGGTGCTGG CGACCGGCGG CTATGGCCGC GCCTATTTCT CGGCGACCTC GGCCCATACC
TGCACCGGCG ACGGCGGAGG CATGGTGGCA CGCGCCGGCT TGCCCCTGCA GGACATGGAG
TTCGTGCAGT TCCACCCGAC CGGCATCTAC GGTTCGGGCT GCCTCATCAC CGAAGGCGCG
CGCGGCGAGG GCGGCTACCT GACCAACAGC GAGGGTGAGC GCTTCATGGA GCGTTACGCG
CCGACCTACA AGGATCTCGC CAGCCGCGAC GTGGTCAGCC GCTGCATCAC CATCGAGATC
CGCGAGGGCC GCGGCGTCGG CCCGCACAAG GATCACATGC ACCTGAACCT GATGCACCTG
CCGCCGGAAA GCCTGGCCGA GCGGCTGCCG GGCATCTCGG AATCGGCCAA GATCTTTGCC
GGCGTGGACG TGACGCGCGA GCCGATCCCG ATCCTGCCGA CCGTGCATTA CAACATGGGC
GGCATCCCCA CCAACTATTG GGGCGAGGTG CTGAATCCGA CGCAGGACAA TCCCGACCAG
GTCTTCCCTG GCCTGATGGC GGTGGGCGAG GCCGGCTGCG CCTCGGTCCA TGGCGCGAAC
CGGCTGGGCT CGAACTCGCT GATCGACCTC GTGGTCTTTG GCCGTGCCGC CGCGATCCGC
GCCGGCCAGG TGATCGACCG CGAGGCGCAG ATCCCCACGA CCAACAAGGA GCAGGTGGAC
AAGGCGCTGG ACCGTTTCGA CCGCATCCGC AATGCCGACG GCTCGGTGTC GACTGCCGAT
CTGCGGCTTG AGATGCAGCG CACCATGCAG GCCGACGCCG CCGTGTTCCG CACCGACAAG
ACGCTGGCCG AAGGCGTCGA CAAGATGCGG GTGATCGCGG GCAAGCTCAG CGACCTCAAG
GTCACGGATC GCAGCCTGAT CTGGAACAGC GACCTGATGG AGACGCTGGA ACTGACCAAC
CTGATGCCCA ACGCCCTGGC GACCATCGTC GCGGCCGAGG CGCGCAAGGA AAGCCGCGGC
GCCCATGCCC ATGAAGACTA CCCCGAGCGG GATGATGCCA ACTGGCGCAA GCACTCGCTT
GCCTGGATCG AAGGCAACGA TGTTAAACTG GCCTATCGGC CCGTGCATCT CGAACCTCTG
ACCAGGCAAG ACGAAGGCGG GATCGACCTG AAAAAGATCG CACCCAAAGC GAGGGTTTAT
TGA
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| Protein sequence | MAAYKYETHE YDVVVVGAGG AGLRATLGMA EQGLRTACVT KVFPTRSHTV AAQGGIAASL
SNMGPDNWQW HMYDTVKGSD WLGDTDAMEY LAREAPKAVY ELEHYGVPFS RTEEGKIYQR
PFGGHTTEFG EGPPVQRTCA AADRTGHAIL HTLYGQSLKE KAEFFIEYFA LDLIITDGAC
TGVVCWKLDD GTIHVFNAKM VVLATGGYGR AYFSATSAHT CTGDGGGMVA RAGLPLQDME
FVQFHPTGIY GSGCLITEGA RGEGGYLTNS EGERFMERYA PTYKDLASRD VVSRCITIEI
REGRGVGPHK DHMHLNLMHL PPESLAERLP GISESAKIFA GVDVTREPIP ILPTVHYNMG
GIPTNYWGEV LNPTQDNPDQ VFPGLMAVGE AGCASVHGAN RLGSNSLIDL VVFGRAAAIR
AGQVIDREAQ IPTTNKEQVD KALDRFDRIR NADGSVSTAD LRLEMQRTMQ ADAAVFRTDK
TLAEGVDKMR VIAGKLSDLK VTDRSLIWNS DLMETLELTN LMPNALATIV AAEARKESRG
AHAHEDYPER DDANWRKHSL AWIEGNDVKL AYRPVHLEPL TRQDEGGIDL KKIAPKARVY
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