Gene Pden_0566 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_0566 
Symbol 
ID4579687 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp539810 
End bp540844 
Gene Length1035 bp 
Protein Length344 aa 
Translation table11 
GC content67% 
IMG OID639767884 
Productdehydratase 
Protein accessionYP_914374 
Protein GI119383318 
COG category[I] Lipid transport and metabolism 
COG ID[COG2030] Acyl dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.090067 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAAGA CCAATCCGGG CCGTTTCTTC GAGGATTACC GCATCGGCCA GGTGATCCGC 
CACGCCGTGC CGCGCACCGT GGCCGAGGGC GAGCGCGCGC TTTACCACGC GCTCTATCCG
GCCCGGCATG CGCTTTATTC CTCGGACGAG TTCGCGGCGG CCTCGGGGCT GGAAGGCAGC
CCGATGGACG ATCTGATCGC CTTTCACATC GTCTTCGGCA AGACGGTGCC CGATATCAGC
CTGAACGCGG TGGCGAACCT GGGCTATGCC GAGGGGCGCT GGCTGAAGCC GGTCTGGCCG
GGCGACACGC TGCGCGCGGA ATCCGAGGTG ATCGGGCTCA AGGAGAACTC GAACGGCAAG
TCCGGCGTGG TCTGGGTCCG CACCCGCGGG CTGAACCAGC TGGACGAGGT GGTGCTGGAA
TATGTGCGCT GGGTCATGGT GCGCAAGGGC GATGCCGCGG CGCCCGCGCC CGAGCCGGTG
GCGCCGGAAC TGGCGAAATC GGTCGCGCCC GCCGATCTGG TGCTGCCCGA GGGGCTGGAT
TTCCTGCAAT ACGATTTCGA CCTGGCCGGC GAGCCGCATC GTTGGGGCGA CTACCAGATC
GGCGAGGTCA TCGACCATGT CGACGGCGTC ACCATCGAGG AGGCCGAGCA CATGCTGGCC
ACCCGGCTGT GGCAGAACAC CGCCAAGGTG CATTTCGACG CCACCTTCCG CGAGGACGGC
CAGCGGCTGA TCTATGGCGG CCACGTCATC AGCATGGCCC GCGCGCTCAG CTTCAATGGG
CTGGCCAATG CGCAGATGAT CGTGGCGCTG AACGGCGGCG CCCATGCCAA TCCCTGCTTT
GCCGGCGATA CGATCCGCGC CTGGTCCGAG GTTCTGGACA AGGCCGACAC CCATGCGCCG
GGCGTCGGCG CGATCCGGTT GCGGCTGGTG GCGCACAAGG GGCGGGCCGG TGATCACGCC
CTGCGCGGCG AGGACGGAAA ATACGCCCCG CAGGTGCTGC TGGACCTGGA TTACTGGGCC
CTGATGCCGA AGTGA
 
Protein sequence
MSKTNPGRFF EDYRIGQVIR HAVPRTVAEG ERALYHALYP ARHALYSSDE FAAASGLEGS 
PMDDLIAFHI VFGKTVPDIS LNAVANLGYA EGRWLKPVWP GDTLRAESEV IGLKENSNGK
SGVVWVRTRG LNQLDEVVLE YVRWVMVRKG DAAAPAPEPV APELAKSVAP ADLVLPEGLD
FLQYDFDLAG EPHRWGDYQI GEVIDHVDGV TIEEAEHMLA TRLWQNTAKV HFDATFREDG
QRLIYGGHVI SMARALSFNG LANAQMIVAL NGGAHANPCF AGDTIRAWSE VLDKADTHAP
GVGAIRLRLV AHKGRAGDHA LRGEDGKYAP QVLLDLDYWA LMPK