Gene Pden_0563 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_0563 
Symbol 
ID4579684 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp538156 
End bp538995 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content69% 
IMG OID639767881 
ProductCitryl-CoA lyase 
Protein accessionYP_914371 
Protein GI119383315 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2301] Citrate lyase beta subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.293195 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCGTC CCTATCGTTC CGTCCTCTAC ATTCCGGCCG CCAATGCGCG GGCCATGGAA 
AAGGCCCAGA CGCTGGCCGC CGATGCGATC ATCTTCGACC TCGAGGACGC CGTGGCGCCT
GCCGAGAAGG TGGGCGCACG GGAATTGCTG GCCCGGGCCT TGCAGGCGGA TTACGGCGGC
CGGGCGCGGA TCGTGCGCAT CAACGGCATG GACACCGAAT GGGGCGAGGG CGATGCCCGC
ACCTTTGCCG CCGGCGCCGA TGCGGTGCTG GTGCCCAAGG TCAGCCGCGG CGCCGATCTT
GACCGCGTGG CGGCGCTGGT GCCCGACACG CCGCTCTGGG CGATGATGGA GACGGCCGAG
GGCATGCTGA ACGCCGCCGA GATCGCCGCC CATCCGCGCT TGCAGGGCAT GGTGATGGGC
ACCAATGATC TGGCCAAGGA ACTGAACTCG CGGTTTCGCG CCGACCGGCT GCCGATGATG
GCGGGTCTGG GCCTGTGCCT GCTGGCCGCG CGGGCGCATG GCCGCGTCAT CGTGGACGGC
GTCTTCAACG CCTTCAAGGA CGAAGAGGGC CTGCGCGCCG AATGCGAACA GGGCCGCGAC
ATGGGCTTCG ACGGCAAGAC CCTGATCCAT CCGGCGCAAC TGGCCGTCGC CAACGAGGTC
TTTGCGCCCT CCGAGGCCGA GGTCGATCTC GCCCGCCGCC AGATCGAGGC CTTCGACGAG
GCGCAGGCCC AGGGCAAGGG CGTCGCCGTG GTGGATGGCA GGATCGTCGA GAACCTGCAT
GTCGAGACCG CCCGCGCCAC GCTGGCCAAG GCGGCAGCGA TTGCCGAACT CGCGGGGTGA
 
Protein sequence
MTRPYRSVLY IPAANARAME KAQTLAADAI IFDLEDAVAP AEKVGARELL ARALQADYGG 
RARIVRINGM DTEWGEGDAR TFAAGADAVL VPKVSRGADL DRVAALVPDT PLWAMMETAE
GMLNAAEIAA HPRLQGMVMG TNDLAKELNS RFRADRLPMM AGLGLCLLAA RAHGRVIVDG
VFNAFKDEEG LRAECEQGRD MGFDGKTLIH PAQLAVANEV FAPSEAEVDL ARRQIEAFDE
AQAQGKGVAV VDGRIVENLH VETARATLAK AAAIAELAG