Gene Pden_0562 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_0562 
Symbol 
ID4579683 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp537341 
End bp538075 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content67% 
IMG OID639767880 
Producthypothetical protein 
Protein accessionYP_914370 
Protein GI119383314 
COG category[R] General function prediction only 
COG ID[COG0730] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.826823 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.284673 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGATGC TGGGCTGGGT GCTGGCGGTG ATCGCCGCCT TTTCGATCGG GCTGGCCAAG 
GGGGGGCTGT CCATGGTCGG CACCATCTCG GTCCCGCTGC TGGCGCTGGT CATGTCGCCG
GTGCAGGCGG CGGGCATCCT GCTGCCGGTC TATATCATCT CGGACATCGG CGGGCTCATC
GCCTTTCGCC GCGATTTCGA TCGCCGGGTG CTGCGGACCC TGGTGCCGGG GGCGATCACC
GGCATCGGGC TGGGCTGGGC CACGGCGCAT CACGTCGACG ACGCGCAGGT TGGGCTGATC
GTGGGCGTGA TCGGCCTGGC CTTCGCACTG AACGCCCTGC TGCGCAGCCG GGTCAGCGCC
AGCGCCAAGC CGCCGCGCTG GGGGGCGGGC AGCTTCTGGG GCACGGTCTC GGGCTATACC
AGCTTCGTGT CGCATTCCGG GGCGGCGCCC TATCAGGTCT ATGCCCAGCC CCTGCGCATG
ACGCCGATGA CCTATGCCGG CACGACGACC ATCTTCTTTG CCATCTGCAA TGCGGTGAAG
CTGATTCCCT ATGCCATGCT GGGCCAGCTT TCGGCGCATA ACCTGTCGGT GGCCGCGGTG
CTGATGGTGC CCGGCGTGCT GGGCGTGCTG GCCGGGTTGT GGCTGGTCAG GCGCATGTCG
CCGCGAATCT TCTATGGCTT CATCACCTGG GCGCTGATGC TGGTTTCGGC CCAGCTGATC
TGGGACGGGA TCTGA
 
Protein sequence
MEMLGWVLAV IAAFSIGLAK GGLSMVGTIS VPLLALVMSP VQAAGILLPV YIISDIGGLI 
AFRRDFDRRV LRTLVPGAIT GIGLGWATAH HVDDAQVGLI VGVIGLAFAL NALLRSRVSA
SAKPPRWGAG SFWGTVSGYT SFVSHSGAAP YQVYAQPLRM TPMTYAGTTT IFFAICNAVK
LIPYAMLGQL SAHNLSVAAV LMVPGVLGVL AGLWLVRRMS PRIFYGFITW ALMLVSAQLI
WDGI