Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_0562 |
Symbol | |
ID | 4579683 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008686 |
Strand | + |
Start bp | 537341 |
End bp | 538075 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639767880 |
Product | hypothetical protein |
Protein accession | YP_914370 |
Protein GI | 119383314 |
COG category | [R] General function prediction only |
COG ID | [COG0730] Predicted permeases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.826823 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.284673 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGATGC TGGGCTGGGT GCTGGCGGTG ATCGCCGCCT TTTCGATCGG GCTGGCCAAG GGGGGGCTGT CCATGGTCGG CACCATCTCG GTCCCGCTGC TGGCGCTGGT CATGTCGCCG GTGCAGGCGG CGGGCATCCT GCTGCCGGTC TATATCATCT CGGACATCGG CGGGCTCATC GCCTTTCGCC GCGATTTCGA TCGCCGGGTG CTGCGGACCC TGGTGCCGGG GGCGATCACC GGCATCGGGC TGGGCTGGGC CACGGCGCAT CACGTCGACG ACGCGCAGGT TGGGCTGATC GTGGGCGTGA TCGGCCTGGC CTTCGCACTG AACGCCCTGC TGCGCAGCCG GGTCAGCGCC AGCGCCAAGC CGCCGCGCTG GGGGGCGGGC AGCTTCTGGG GCACGGTCTC GGGCTATACC AGCTTCGTGT CGCATTCCGG GGCGGCGCCC TATCAGGTCT ATGCCCAGCC CCTGCGCATG ACGCCGATGA CCTATGCCGG CACGACGACC ATCTTCTTTG CCATCTGCAA TGCGGTGAAG CTGATTCCCT ATGCCATGCT GGGCCAGCTT TCGGCGCATA ACCTGTCGGT GGCCGCGGTG CTGATGGTGC CCGGCGTGCT GGGCGTGCTG GCCGGGTTGT GGCTGGTCAG GCGCATGTCG CCGCGAATCT TCTATGGCTT CATCACCTGG GCGCTGATGC TGGTTTCGGC CCAGCTGATC TGGGACGGGA TCTGA
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Protein sequence | MEMLGWVLAV IAAFSIGLAK GGLSMVGTIS VPLLALVMSP VQAAGILLPV YIISDIGGLI AFRRDFDRRV LRTLVPGAIT GIGLGWATAH HVDDAQVGLI VGVIGLAFAL NALLRSRVSA SAKPPRWGAG SFWGTVSGYT SFVSHSGAAP YQVYAQPLRM TPMTYAGTTT IFFAICNAVK LIPYAMLGQL SAHNLSVAAV LMVPGVLGVL AGLWLVRRMS PRIFYGFITW ALMLVSAQLI WDGI
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