| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_0555 |
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| Symbol | sucA |
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| ID | 4579676 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | - |
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| Start bp | 526971 |
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| End bp | 529937 |
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| Gene Length | 2967 bp |
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| Protein Length | 988 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639767873 |
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| Product | 2-oxoglutarate dehydrogenase E1 component |
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| Protein accession | YP_914363 |
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| Protein GI | 119383307 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0567] 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes |
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| TIGRFAM ID | [TIGR00239] 2-oxoglutarate dehydrogenase, E1 component |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0848498 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGATC AATCCCCCAA CTCGGCCTTC CACGATTCAA GCTTCCTGCA AGGCCATAAC
GCGGCCTATG TCGAGCAGCT TTATGGCCAA TGGGCCCAGA ACCCCGCGGC GGTCGATCAG
GCGTGGGACG CCTTCTTCCG CAGCCTGGGC GATGACGAGG CCGTGGTCAC CCGCGAGGCC
AAGGGCGCAA GCTGGCATCG TGCCGACTGG CCGCCGGTGC CCGCGGACGA CACCACCGCG
GCGCTGACCG GCGAATGGCC GATGCTGCCC AAGACCGAGG CCAAGGCTGC ACTGGACAAG
ATCGCCGCCA AGGCCGGCGA AAAGGGCGTG AACCTGACGG ACGATCAGCT CAAGCGCGCC
GTGCTGGACA GCGTCCGCGC CATCATGCTG ATCCGCGCCT TCCGCATCCG CGGCCACCTG
CATGCCGACC TGGACCCGCT GGGCATGCGC GAGATCCCCG ACCACGGCGA GCTGGACCCC
AAGACCTATG GCTTCTCCGA GGCCGATCTG GACCGGCCGA TCTTCATCGA CAACGTGCTT
GGCCTGCAGA TCGCCACGAT CCGCCAGATC GTGGACCTGA TGAGCCGCAC CTATTGCGGC
ACCTTCGCGC TGCAATTCAT GCATATCTCG AACCCCGAGG AAGCCGCCTG GCTCAAGGAG
CGGATCGAGG GCTACGGCAA GGAGATCGCC TTTACCCGCG AGGGGCGCCG CGCCATCCTG
AACAAGCTGG TCGAGGCCGA GGGCTTCGAA AAGTTCCTGC ATGTCAAATA CATGGGCACC
AAGCGCTTCG GCCTTGACGG CGGCGAGGCG CTGATCCCGG CGATGGAGCA GATCATCAAG
CGCGGCGGCG CGCTTGGCGT CAAGGACGTG GTGATCGGCA TGCCGCATCG CGGCCGCCTC
TCGGTCTTGG CCAACGTCAT GGGCAAGCCC TATCGCGCCA TCTTCCACGA ATTCCAGGGC
GGCAGCTACA AGCCCGACGA CGTGGACGGG TCGGGCGACG TGAAATACCA CCTCGGCGCC
TCGTCGGACC GCACCTTCGA CGACAATACC GTGCACCTGT CCCTGACTGC GAACCCCTCG
CACCTCGAGG CCGTGAACCC GGTGGTGCTG GGCAAGGTCC GCGCCAAGCA GGACCAGCTT
TCCGACCACA CCCACCGCAC GGCAGTGCTG CCGATCCTGC TGCATGGCGA CGCGGCCTTT
GCCGGCCAGG GGATCGTGGC GGAATGCTTC CAGCTTTCCG GCATCAAGGG TCACCGCACC
GGCGGCTGCA TCCATATCGT GGTGAACAAC CAGATCGGCT TTACCACCGC GCCGCATTTC
AGCCGCACCT CGCCCTATCC GACCGACATC GCGCTGATGG TCGAGGCGCC GATCTTCCAC
GTCAACGGCG ACGACCCCGA GGCGGTGGTG CACGCCGCCC GCGTCGCGAC CGAGTTCCGG
CAAAAGTTCC ACAAGGACGT GGTCATCGAC ATCTTCTGCT ATCGCCGCTT CGGTCACAAC
GAAGGCGACG AGCCGATGTT CACCAACCCG GCGATGTACA AGGCGATCAA GGGCCACAAG
ACCACGCTGC AACGCTATAC CGAGCGGCTG GTCGCCGACG GGCTGGTCCC CGAGGGCGAG
ATCGAGGAGA TGAAGGCCGC CTTCCAGTCG CACCTGAACG AAGAGTTCGA GGTCGGCAAA
AACTTCAAGC CGAACAAGGC CGACTGGCTG GACGGCAAGT GGTCGGGGAT CGAGGCCGAG
CATGCCGAGG AAAACCTGGG CCAGACCGGC ATCGCGCCCG AGACCATGGC CGAGATCGGC
AGCGCGCTGA CCCGGGTGCC CGAAGGCTTC GACCTGCACA GGACCGTGGG CCGGCTGCTG
GAATCCAAGA AGCAGATGTT CGAGACCGGC AAGGGCTTCG ACTGGGCGAC GGGCGAGGCG
CTGGCCTTCG GCTCGCTGCT GGTCGAGGGT CATCCGGTGC GGCTGGCCGG CCAGGATTCG
ACCCGCGGCA CCTTCTCGCA GCGCCATTCC GCCTTTGTCG ATCAGGCCAC CGAGGAACGC
TGCTACCCGC TGAACCACAT CCGCGGCGGG CAGGCGCGCT ACGAAGTCAT CGACTCGATG
CTGTCGGAAT ATGCGGTTCT GGGCTTCGAA TACGGCTATT CGCTGGCCGA GCCGAACAGC
CTGGTCATGT GGGAAGCCCA GTTCGGCGAT TTCGCCAACG GCGCCCAGAT CATGTTCGAC
CAGTTCATCA CCTCGGGCGA AAAGAAATGG CTGCGCATGT CCGGCCTCGT CATGCTGATG
CCGCACGGTT ACGAGGGCCA GGGCCCGGAG CACAGCTCGG CCCGGCTGGA ACGCTGGCTA
CAGATGTGCG CCGAGGACAA CTGGATCGTG GCGAACTGCA CCACGCCGGC GAACTATTTC
CACATCCTGC GCCGGCAGCT CAAGCGACCC TTCCGCAAGC CGCTGGTGCT GATGACGCCG
AAATCGCTGC TGCGCCACCC GCTGGCCGTG TCCACGGCGG ACGAGTTCCT GACCGGCTCG
ACCTTCAACC GGGTGCTGGT GGACGATGCC GACCGCGGCA AGTCCGAGTT CAAGCTGGCC
CCGGACGACA AGATCCGCCG CGTGGTGATC TGCTCGGGCA AGGTCTATTA CGACCTCGCG
CAGGCCCGCG ACGCGGCCGG CGCCGAGGAT GTCTATATCC TGCGGCTGGA GCAATTCTAT
CCCTTCCCGG CCCAGACCAT GTCCAAGGAG CTGGAACGCT TCAAGGACGC CGAGATCGTC
TGGTGCCAGG AGGAACCCAA GAATCAGGGC GGCTGGACCT TCGTCGAGCC CAATATCGAA
TGGGTTCTGT CGCGCATCGG CGCCAAGCAT GGCCGGCCGC GCTATGTCGG ACGCCATGCG
GCGGCCTCGC CGGCCACCGG GCTTGCCTCG CGCCACAAGG CCGAGCAAGA GGCCCTGGTC
CACGAAGCGA TCACCATCGG GGCCTGA
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| Protein sequence | MNDQSPNSAF HDSSFLQGHN AAYVEQLYGQ WAQNPAAVDQ AWDAFFRSLG DDEAVVTREA
KGASWHRADW PPVPADDTTA ALTGEWPMLP KTEAKAALDK IAAKAGEKGV NLTDDQLKRA
VLDSVRAIML IRAFRIRGHL HADLDPLGMR EIPDHGELDP KTYGFSEADL DRPIFIDNVL
GLQIATIRQI VDLMSRTYCG TFALQFMHIS NPEEAAWLKE RIEGYGKEIA FTREGRRAIL
NKLVEAEGFE KFLHVKYMGT KRFGLDGGEA LIPAMEQIIK RGGALGVKDV VIGMPHRGRL
SVLANVMGKP YRAIFHEFQG GSYKPDDVDG SGDVKYHLGA SSDRTFDDNT VHLSLTANPS
HLEAVNPVVL GKVRAKQDQL SDHTHRTAVL PILLHGDAAF AGQGIVAECF QLSGIKGHRT
GGCIHIVVNN QIGFTTAPHF SRTSPYPTDI ALMVEAPIFH VNGDDPEAVV HAARVATEFR
QKFHKDVVID IFCYRRFGHN EGDEPMFTNP AMYKAIKGHK TTLQRYTERL VADGLVPEGE
IEEMKAAFQS HLNEEFEVGK NFKPNKADWL DGKWSGIEAE HAEENLGQTG IAPETMAEIG
SALTRVPEGF DLHRTVGRLL ESKKQMFETG KGFDWATGEA LAFGSLLVEG HPVRLAGQDS
TRGTFSQRHS AFVDQATEER CYPLNHIRGG QARYEVIDSM LSEYAVLGFE YGYSLAEPNS
LVMWEAQFGD FANGAQIMFD QFITSGEKKW LRMSGLVMLM PHGYEGQGPE HSSARLERWL
QMCAEDNWIV ANCTTPANYF HILRRQLKRP FRKPLVLMTP KSLLRHPLAV STADEFLTGS
TFNRVLVDDA DRGKSEFKLA PDDKIRRVVI CSGKVYYDLA QARDAAGAED VYILRLEQFY
PFPAQTMSKE LERFKDAEIV WCQEEPKNQG GWTFVEPNIE WVLSRIGAKH GRPRYVGRHA
AASPATGLAS RHKAEQEALV HEAITIGA
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