| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_0550 |
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| Symbol | |
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| ID | 4579788 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | - |
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| Start bp | 522559 |
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| End bp | 523053 |
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| Gene Length | 495 bp |
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| Protein Length | 164 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639767868 |
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| Product | lytic transglycosylase, catalytic |
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| Protein accession | YP_914358 |
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| Protein GI | 119383302 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATCCA TTATCGCATT GTTGGCGCTG GGCGGCGTGC TGGCTGTTGG CGCCTGCGGC
GACAATCGGG TCGATCCCGA CCGCCGCTAT CTGGTCGAAC CCCGCGCCTC GGCCGCCCAG
GTCGCCGCGC TGCATCCGAA CGAGACGCCG GAACTGCGGC GGCTCATCAA CAAATACGCC
GCGGAATACG AGGTGCCGGT CGATCTGGTG CATCGCGTCA TCATCCGCGA ATCGACCCAT
CGCCCCGGGG CCCGCAACGG CCCCTATTAC GGGCTGATGC AGATCCTGCC CGCCACCGCG
CGCGGCATGG GCTATCGCGG CTCGCCCGCC GGGCTGCTGG ATGCCGAGAC GAACCTGAAA
TACGGCGTCA AATACCTGCG CGGCGCCTAT ATGGTCGCCG ACGGCAACAA GGATGCCGCG
GTAAAGTGGT ATGCCCGCGG CTATTACTAC GAGGCCAAGC GCAAGGGCCT GCTGGAAGCA
ACCGGCCTGC GCTGA
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| Protein sequence | MKSIIALLAL GGVLAVGACG DNRVDPDRRY LVEPRASAAQ VAALHPNETP ELRRLINKYA
AEYEVPVDLV HRVIIRESTH RPGARNGPYY GLMQILPATA RGMGYRGSPA GLLDAETNLK
YGVKYLRGAY MVADGNKDAA VKWYARGYYY EAKRKGLLEA TGLR
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