Gene Pden_0544 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_0544 
Symbol 
ID4579782 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp517064 
End bp518035 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content69% 
IMG OID639767862 
Productdihydropteroate synthase 
Protein accessionYP_914352 
Protein GI119383296 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0294] Dihydropteroate synthase and related enzymes 
TIGRFAM ID[TIGR01496] dihydropteroate synthase 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGATT ATTTTCGCCC CATTCCCTGT GAGACGGGTC GCTGGCAATT GGCCGGCGGT 
TGGGTGCGCT TTTCGCAATT CGAGCTTTTG CGCCGCGGCG AGGTGCCCCG CGTGGTGGAC
AGCGTCCCCG AGGCGGTGCT GGCGGCGCTG ATCGCGCCTC GCGCGCCGCT TCTGGGCCTT
TCCATGGATC GCCCCCGCAT CATGGGGATC GTCAACGCCA CGCCCGACAG TTTCTCGGAC
GGCGGAAGCT ATGACGGGGC CGAGCAGGCG CGGCTGCTGG CCGGGCAGGG GGCCGAGATC
CTGGATATCG GCGGCGAATC AACCAGGCCG GGTGCCCGCG AAGTGCCGGT GGCCGAGGAA
ATCGCCCGCG TGGCCCCCGC CATTGCCGCG GCGCGGGGGC TGGCGGCGGT CTCGATCGAT
ACCCGCAAGG CAGGGGTGGC GCGGGCCGCC ATCGTGGCCG GGGCGGGGTT GGTCAACGAT
GTTTCGGGCT TCGACTTCGA CCCGGACATG GCCGGGCTGG TGGCGGCGGC CGGCGTGCCG
GTCTGCCTGA TGCACGCCCA GGGCATTCCC GAAACCATGC AGGACAACCC GACCTATGGC
GATGTGCTGC TGGACGTCTA CGACGCCCTG GCCGAGCGTA TCGCGCGGGC CGAGGCGGCG
GGCATCCCCC GCGACAGGAT CGTGATCGAT CCCGGCATTG GTTTCGGCAA GACGCAGGCG
CATAATCTGG CCATCCTGCG GCGCATCTCG CTCTACCATG GGTTGGGTTG CACCGTGCTG
CTGGGGGTTT CGCGCAAGCG GTTCATCGGC AGCATCGGCG GGGCAGAGCG CCCGGCCGAC
CGGGTGGCGG GAACGCTGGC GCTGACGCTG GCCGGGATCG CGCAGGGGAT ACAGATCCAC
CGCGTCCATG ACGCGGCAGA AACACGGCAG GGCCTCGCTC TTTGGCGGGC CGTAACCGCA
GAGACAAGAT GA
 
Protein sequence
MTDYFRPIPC ETGRWQLAGG WVRFSQFELL RRGEVPRVVD SVPEAVLAAL IAPRAPLLGL 
SMDRPRIMGI VNATPDSFSD GGSYDGAEQA RLLAGQGAEI LDIGGESTRP GAREVPVAEE
IARVAPAIAA ARGLAAVSID TRKAGVARAA IVAGAGLVND VSGFDFDPDM AGLVAAAGVP
VCLMHAQGIP ETMQDNPTYG DVLLDVYDAL AERIARAEAA GIPRDRIVID PGIGFGKTQA
HNLAILRRIS LYHGLGCTVL LGVSRKRFIG SIGGAERPAD RVAGTLALTL AGIAQGIQIH
RVHDAAETRQ GLALWRAVTA ETR