| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_0523 |
|---|
| Symbol | |
|---|
| ID | 4578710 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Paracoccus denitrificans PD1222 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008686 |
|---|
| Strand | + |
|---|
| Start bp | 493991 |
|---|
| End bp | 495088 |
|---|
| Gene Length | 1098 bp |
|---|
| Protein Length | 365 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 639767840 |
|---|
| Product | tRNA 2-selenouridine synthase |
|---|
| Protein accession | YP_914331 |
|---|
| Protein GI | 119383275 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2603] Predicted ATPase |
|---|
| TIGRFAM ID | [TIGR03167] tRNA 2-selenouridine synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGACATCC GCCTGAAATC GCTGTCGGAT CCGGCGCTGT CCGGGTTCGA CACCATCATC
GACACGCGCT CGCCCCTCGA ATTCGCCGAG GATCATTTGC CGGGCGCGAT CAATCTGCCG
GTGCTCTCGG ACGAGGAGCG CGTGCAGGTC GGCACGATCT ACAAGCAGGT CTCTCCCTTC
GATGCCCGCA AGCTGGGCGG CGCCATGGTC GCCGCCAATG CCGCGCGCCA TATCGCCGGG
CCGCTGGCCG GTTTCGGCGG AGGCTGGCGG CCGCTGGTCT ATTGCTGGCG CGGCGGGCAG
CGCTCGGGCG CCTTTGCCAC CATCCTCCAG CAGATCGGCT GGCGGGTCGG GCGCATCGAG
GGCGGCTACA AGGCATGGCG GGCGCTGGTG GTCGAGCGCG TCACTGCAGC CGTCGCTGCC
CCGGTGGTGG TGCTGGACGG CAATACCGGC AGCGCCAAGA CCGAGATCCT GCACCGCCTC
GCCGCCCGGG GCCATCAGGT CATCGACCTT GAGGGGTTTG CGAACCACCG CGGCAGCCTG
TTCGGTGCCA TGCCGGGCGG CCAGCCCAGC CAGAAGCTGT TCGAATGCCG CCTTGCCATG
GCGCTTGAGG CGCTGGACCC CGGCCGGCCG CTGCTGGTCG AGGCGGAAAG CTCGCGCATC
GGCGACCTGA ACCTGCCGCG CGGCATCTGG CAGGCGATCG TCGCCGCGCC GCGCCTCCGC
CTTGCCGTCC CGGTCGAGGC CCGCGCCGCC TATACCGCCC GCGCCTATGC CGATACCTGC
GCCGATCCCC AGGCAGTGGC GCGGATCGTG AACCTGCTGC GCCCGCTGCA CCCGGCCGAC
CGGATCGAAG CCTGGCTGCG CATGATCGCT GCCGCCGACT GGAGCGGGCT GGCCGAAGGG
CTGATGCGCG ACCATTACGA CCCGCGCTAT GAAAGGCACC GCGCGCGCCA TGACGACGGT
CGCGGCCCGG TGGTGGCGCT GGACGGCCTG GACGACCTGG ATGCCGCAGC GGCGCGGGTC
GAGGCGGCGC TGGCGGGCCT GACCTTGCCA AGGCCGGCGC CGGCGGCAAG CCCGGTCGCC
TCCGGCGGGA GTATTTGA
|
|---|
| Protein sequence | MDIRLKSLSD PALSGFDTII DTRSPLEFAE DHLPGAINLP VLSDEERVQV GTIYKQVSPF
DARKLGGAMV AANAARHIAG PLAGFGGGWR PLVYCWRGGQ RSGAFATILQ QIGWRVGRIE
GGYKAWRALV VERVTAAVAA PVVVLDGNTG SAKTEILHRL AARGHQVIDL EGFANHRGSL
FGAMPGGQPS QKLFECRLAM ALEALDPGRP LLVEAESSRI GDLNLPRGIW QAIVAAPRLR
LAVPVEARAA YTARAYADTC ADPQAVARIV NLLRPLHPAD RIEAWLRMIA AADWSGLAEG
LMRDHYDPRY ERHRARHDDG RGPVVALDGL DDLDAAAARV EAALAGLTLP RPAPAASPVA
SGGSI
|
|---|
| |