Gene Pden_0520 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_0520 
Symbol 
ID4578707 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp489926 
End bp490564 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content69% 
IMG OID639767837 
ProductGDSL family lipase 
Protein accessionYP_914328 
Protein GI119383272 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2755] Lysophospholipase L1 and related esterases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGCTGA GAACCCTTGT CCTGATCCTG GCCCTTGCGG CCGTGCCGGC GGCAGCGACG 
CCGCTGCGCA TCTTGGCCTT CGGCGACAGC CTGACCGAAG GCTACGGCCT GCCCCGCAAG
GACGGGCTGG TGCCGCAATT GCAGGACTGG CTGAGGGCAC GCGGCCATGA CGTGCTGGTG
CTGAACGGCG GGCTCTCGGG CGACACCACA GCGGGCGGGC GGGTGCGGAT CGGCTATTCG
CTGGCCCGCC ACAAGCCCGA TGCGGTGATC GTCGAGCTAG GCGGCAACGA CCTGCTGATG
GGCTTTGCCC CGCAGATGGT CGAGGGCAAC CTGGATTCGA TCCTGGGCCA GGCCGGCAGG
GGCGGCCGGC CGCTGCTGCT GGTCGGCATC GCCTCGCCCG ACCACGACGA CCCCCTGCGC
CGCGACTGGG CCGGGATCTG GCCGCGCATG GCCACGCAGC ACGATGCCCT GCTGATGGAG
AACCTGTACC AGCCGCTTTT CGACCTGCCG GGCGACGGCT ACAAGGCCAT GCTGCAACCC
GACGGGCTGC ATGCCTCGGC CAAGGGCGTC GGCCTGATCG TGCAATCGCT GGGCCCCAAG
GTCGAGGCGC TGATCGAAAA GGCCGAAGCC CGCCGCTAA
 
Protein sequence
MMLRTLVLIL ALAAVPAAAT PLRILAFGDS LTEGYGLPRK DGLVPQLQDW LRARGHDVLV 
LNGGLSGDTT AGGRVRIGYS LARHKPDAVI VELGGNDLLM GFAPQMVEGN LDSILGQAGR
GGRPLLLVGI ASPDHDDPLR RDWAGIWPRM ATQHDALLME NLYQPLFDLP GDGYKAMLQP
DGLHASAKGV GLIVQSLGPK VEALIEKAEA RR