Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_0520 |
Symbol | |
ID | 4578707 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008686 |
Strand | - |
Start bp | 489926 |
End bp | 490564 |
Gene Length | 639 bp |
Protein Length | 212 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639767837 |
Product | GDSL family lipase |
Protein accession | YP_914328 |
Protein GI | 119383272 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2755] Lysophospholipase L1 and related esterases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATGCTGA GAACCCTTGT CCTGATCCTG GCCCTTGCGG CCGTGCCGGC GGCAGCGACG CCGCTGCGCA TCTTGGCCTT CGGCGACAGC CTGACCGAAG GCTACGGCCT GCCCCGCAAG GACGGGCTGG TGCCGCAATT GCAGGACTGG CTGAGGGCAC GCGGCCATGA CGTGCTGGTG CTGAACGGCG GGCTCTCGGG CGACACCACA GCGGGCGGGC GGGTGCGGAT CGGCTATTCG CTGGCCCGCC ACAAGCCCGA TGCGGTGATC GTCGAGCTAG GCGGCAACGA CCTGCTGATG GGCTTTGCCC CGCAGATGGT CGAGGGCAAC CTGGATTCGA TCCTGGGCCA GGCCGGCAGG GGCGGCCGGC CGCTGCTGCT GGTCGGCATC GCCTCGCCCG ACCACGACGA CCCCCTGCGC CGCGACTGGG CCGGGATCTG GCCGCGCATG GCCACGCAGC ACGATGCCCT GCTGATGGAG AACCTGTACC AGCCGCTTTT CGACCTGCCG GGCGACGGCT ACAAGGCCAT GCTGCAACCC GACGGGCTGC ATGCCTCGGC CAAGGGCGTC GGCCTGATCG TGCAATCGCT GGGCCCCAAG GTCGAGGCGC TGATCGAAAA GGCCGAAGCC CGCCGCTAA
|
Protein sequence | MMLRTLVLIL ALAAVPAAAT PLRILAFGDS LTEGYGLPRK DGLVPQLQDW LRARGHDVLV LNGGLSGDTT AGGRVRIGYS LARHKPDAVI VELGGNDLLM GFAPQMVEGN LDSILGQAGR GGRPLLLVGI ASPDHDDPLR RDWAGIWPRM ATQHDALLME NLYQPLFDLP GDGYKAMLQP DGLHASAKGV GLIVQSLGPK VEALIEKAEA RR
|
| |