| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_0505 |
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| Symbol | |
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| ID | 4581047 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | - |
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| Start bp | 476615 |
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| End bp | 477634 |
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| Gene Length | 1020 bp |
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| Protein Length | 339 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639767822 |
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| Product | periplasmic binding protein/LacI transcriptional regulator |
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| Protein accession | YP_914313 |
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| Protein GI | 119383257 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.298417 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAAGA CCAAACTGCT GCGCGCGGCG CTGGCGGGCT CGGCCCTGAC CCTGATCGCC
GGCATGGCGC AGGCGGACAG TGCCTGTCTG ATCACCAAGA CCGACACCAA CCCCTTTTTC
GTGAAGATGA AGGAAGGCGC GCAGGCCAAG GCCGCCGAAC TGGGGATCGA ACTGAAATCC
TATGCCGGCC GCATCGACGG CGATCACGAA AGCCAGGTTT CGGCGGTCGA GGCCTGCATC
GCCGACGGCG CCAAGGGCAT CCTGATCACC GCCTCGGACA CCAAGGCCAT CGTGGATTCG
GTCAAGGCGG CGCGGGATGC CGGGCTGCTG GTCATCGCGC TGGACACGCC GCTGGACCCG
ATCGACGCGG CGGACGCGAC CTTCGCCACC GACAACTTCA AGGCCGGCGA GCTGATCGGC
CAATGGGCCA AGGCCACCAT GGGCGACGCG GCGGCCGAGG CCAGGATCGC GCTGCTGGAC
CTGGCGATCT CGCAGCCTTC GGTCGACGTG CTGCGCGACC AGGGCTTCCT GCAGGGCTTC
GGCGTCGAAC TGGGCGACCC CGAGAAATGG GGCGACGAGA CCGATCCGCG CATCGTCGGC
CACGAGGTCA CCTCGGGCAA CGAGGAAGGC GGGCTGAAGG CGATGGAGAC GCTGCTGGCC
AAGGATCCCG ACATCAACCT GGTCTATACC ATCAACGAAC CCGCCGCCGC CGGTGCGTAT
GAGGCGCTGA AGGCCGTCGG GCGCGAGGGC GACGTGCTGA TCGTCTCGGT CGATGGCGGC
TGCCCGGGCG TGGAGAACGT CAAGGACGGC GTGATCGGCG CCACCTCGCA GCAATATCCG
CTGGACATGG CGTCGCGGGG GATCGAGGCC ATCGCCGCCT TCGCCAAGGA CGGCACCAGG
CCCGAGCCGA CCGAGGGCAA GGATTTCGTC GATACCGGCG TGCAGCTTGT CACCGACAAG
CCCGCCGAGG GCGTCGAATC CATCGACAGC GCCAAGGGCA CCGAGCTCTG CTGGGGCTGA
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| Protein sequence | MTKTKLLRAA LAGSALTLIA GMAQADSACL ITKTDTNPFF VKMKEGAQAK AAELGIELKS
YAGRIDGDHE SQVSAVEACI ADGAKGILIT ASDTKAIVDS VKAARDAGLL VIALDTPLDP
IDAADATFAT DNFKAGELIG QWAKATMGDA AAEARIALLD LAISQPSVDV LRDQGFLQGF
GVELGDPEKW GDETDPRIVG HEVTSGNEEG GLKAMETLLA KDPDINLVYT INEPAAAGAY
EALKAVGREG DVLIVSVDGG CPGVENVKDG VIGATSQQYP LDMASRGIEA IAAFAKDGTR
PEPTEGKDFV DTGVQLVTDK PAEGVESIDS AKGTELCWG
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