| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_0490 |
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| Symbol | |
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| ID | 4579107 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | - |
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| Start bp | 461513 |
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| End bp | 463006 |
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| Gene Length | 1494 bp |
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| Protein Length | 497 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639767806 |
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| Product | putative oxidoreductase |
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| Protein accession | YP_914298 |
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| Protein GI | 119383242 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases |
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| TIGRFAM ID | [TIGR01317] glutamate synthases, NADH/NADPH, small subunit
[TIGR01318] glutamate synthase small subunit family protein, proteobacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.221306 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCACGC AGAAGATGCT CAAATTCGTC ACCATCGGGC GCGAGATGCC CGAGAAACGT
GACGCGGCAT CCCGCTCGGA AGATTTCCAC GAGATCTATC GCGAGTTCGC CGAGGCCAAG
GCCAAGGAAC AGGCCAGCCG GTGCAGCCAA TGCGGCGTGC CCTATTGCCA GAGCCATTGC
CCGCTGCACA ACAACATCCC CGACTGGCTG CGCCTGACCG CCGAGGGCCG CACGCAGGAA
GCCTATCTGC GCAGCCAGGA GACCAACACC TTCCCCGAGA TCTGCGGCCG CATCTGCCCG
CAGGACCGGC TGTGCGAGGG CAATTGCGTC ATCGAGCAAT CCGGCCACGG TACCGTCACC
ATCGGCGCCA TCGAGAAATA CATCACCGAC ACCGCCTGGG AAGAGGGCTG GATCACCCCG
GTCGCCCCGA CGCAGGAACG CCCCGAATCC ATCGGCATCA TCGGCGCCGG GCCGGGCGGG
CTTGCCGCCG CCGACCGGCT GCGCCGCATG GGCTTCCAGG TCACGGTCTA TGACCGTCAC
GACCGCGCCG GCGGGCTGCT GATCTATGGC ATCCCCGGCT TCAAGCTGGA AAAGCAGGTG
GTCGAGCGCC GCACGCAGCA GCTTGTCGAG GGCGGCGTGG ATTTCGTGCT GAACGTGAGC
GTCGGCGAAG ACATCAGCTT CGACGCCATC CGCGGCAAGC ATGATGCGGT GCTGATCGCG
ACCGGCGTCT ACAAGACCCG CGACCTGGAC ATCGACAATG CCGCCGCCAA GGGCGTGGTG
CGGGCGCTGG ACTACCTGAC CGCCTCGAAC CGGGTCGATC TGGGCGACGA GATCCCCGAT
TACGAGGATG GCGAACTGAA TGCCAGGGGC AAGCGCGTCG TGGTCATCGG CGGCGGCGAC
ACCGCCATGG ACTGCGTGCG CACCGCCATC CGCCAGGGCG CGCAATCGGT GAAATGCCTT
TACCGCCGCG ACCGGGCCAA CATGCCGGGC AGCCAGCGCG AGGTGCAGAA TGCCGAGGAA
GAAGGCGTCG AATTCGTCTG GCTTTCCGCA CCCGGCGCCT TTACCGGCCA TGTCACCGGC
GAGGCCATGG TCGCGCAGGA ACGCGACGTG GACGATACCG GCGAGATCCC GACCATCAGC
GCGGTGCGCG TGCAGAAGAT GCGGCTGGGC GCGCCGGATG TCTCGGGCCG TCAGTCGCCC
GAACTGATCG AGGGCGCCGA TTACGACGAG CCGGCGGAAC TGGTCATCAA GGCGCTGGGT
TTCGAACCCG AAGAACTGCC GCGCCTTTGG GGCGTGGACG GGCTGGAGGT GACGCGCTGG
GGCACGATCA AGGCCGATTA CCAGACGCAC CAGACCAGCC TGCCCGGCGT CTATGCCGTG
GGCGACATCG TGCGCGGCGC CAGCCTGGTG GTCTGGGCGA TCCGCGACGG CCGCGAGGCT
GCCGACAGCA TCGCCGGCTA CCTGTCCGGT GCCGCCCGGG TCGCCGCCGA GTAA
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| Protein sequence | MATQKMLKFV TIGREMPEKR DAASRSEDFH EIYREFAEAK AKEQASRCSQ CGVPYCQSHC
PLHNNIPDWL RLTAEGRTQE AYLRSQETNT FPEICGRICP QDRLCEGNCV IEQSGHGTVT
IGAIEKYITD TAWEEGWITP VAPTQERPES IGIIGAGPGG LAAADRLRRM GFQVTVYDRH
DRAGGLLIYG IPGFKLEKQV VERRTQQLVE GGVDFVLNVS VGEDISFDAI RGKHDAVLIA
TGVYKTRDLD IDNAAAKGVV RALDYLTASN RVDLGDEIPD YEDGELNARG KRVVVIGGGD
TAMDCVRTAI RQGAQSVKCL YRRDRANMPG SQREVQNAEE EGVEFVWLSA PGAFTGHVTG
EAMVAQERDV DDTGEIPTIS AVRVQKMRLG APDVSGRQSP ELIEGADYDE PAELVIKALG
FEPEELPRLW GVDGLEVTRW GTIKADYQTH QTSLPGVYAV GDIVRGASLV VWAIRDGREA
ADSIAGYLSG AARVAAE
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