| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_0488 |
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| Symbol | |
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| ID | 4579105 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | - |
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| Start bp | 456189 |
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| End bp | 460739 |
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| Gene Length | 4551 bp |
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| Protein Length | 1516 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639767804 |
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| Product | glutamate synthase (ferredoxin) |
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| Protein accession | YP_914296 |
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| Protein GI | 119383240 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0069] Glutamate synthase domain 2 |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAGGACA GCGACATGAC GGGCTGGGAA CAGCAGGAAC AGGCCCGCCG CGACTGGATG
GCGGAACATT CGCTTTACCG TGCCGAGGAC GAGCATTCGT CCTGCGGCGT CGGGCTGGTC
GTCAGCATCG ACGGCAAGAT CAGCCGCAAG GTCGTGGAAA GCGGCATCAA CGCGCTGAAG
GCGATCTGGC ATCGCGGCGC CGTGGATGCG GACGGCAAGA CCGGCGACGG CGCCGGCATC
CATGTGCAGA TCCCGGTGCC CTTCTTCTAT GACCAGGTGC GCCGCACCGG GCACGAGCCC
GACCACGACA AGCTGATCGC CGTGGGCCAG GTGTTCCTGC CGCGCACCGA CTTCGCCGCG
CAGGAACGCT GCCGGACCAT CGTGGAATCC GAAGTGCTGC GCATGGGCCA TTACATCTAT
GGCTGGCGGC ACGTGCCGGT GAACACCGCG GTGCTGGGCG AAAAGGCCAA CGCCACCCGC
CCCGAGATCG AGCAGATCCT GATCCGCTGC GACAAGGACA TCGACGACGA GCAGTTCGAG
CGCGAACTCT ACATCATCCG CCGCCGGATC GAGAAGGCGG CGGTGGCGGC GCAGATCGCC
GGCATGTATA TCTGCACGCT GTCGTGCCGC AGCATCATCT ACAAGGGCAT GATGCTGGCC
GAGCAGGTGG CCGAGTTCTA TCCCGACCTC AAGGACGAGC GCTTCGAGTC CGCCTTTGCC
ATCTATCACC AGCGCTATTC CACCAACACC TTCCCGCAAT GGTGGCTGGC GCAACCCTTC
CGCATGCTGG CCCATAACGG CGAGATCAAC ACGCTGAAGG GCAACTCGAA CTGGATGCGC
AGCCACGAGA TCCGCATGGC GTCGCGGACC TTCGGCGAGA TGGCCGAGGA CATCAAGCCG
ATCATCCCCG GCGGCTCGTC CGACTCGGCG GCGCTGGATG CGGTGTTCGA GGTGCTGGTC
CGGTCCGGCC GCAACGCACC GATGACCAAG ACCATCCTGG TGCCGGAAGC CTGGTCCAAG
GCCACCACCG ACATGCCCAG GGCCTGGGCG GACATGTATG CCTATTGCAA CTCGATCATG
GAGCCCTGGG ACGGGCCGGC TGCGCTGGCG ATGACCGACG GGCGCTGGGT CTGCGGCGGC
CTGGACCGCA ACGGGCTACG GCCGCTGCGC TATGTGGTGA CCGGCGACAA CCTGCTGATC
GCGGGTTCCG AGGCCGGCAT GGTCCCGATC AACGAAACCG CGGTGCGCGA AAAGGGCGCG
CTGGGTCCGG GCCAGATGAT CGCCGTCGAC ATGGCCGAGG GCAAGCTTTA CCACGACCGC
GAGATCAAGG ACCACCTGGC CGCCAGCCAG CCCTTTGGCG ATTGGGTGGA AAAGGTCGTG
CAGCCCTCGG AACTGATGGC GAAGCTGCCC GAGACCGCGC TTCACGACGG CGAGGAACTG
CGCCGCCGCC AGATCGCGGT CGGCTATACC GTCGAACTGG TCGAGCAGAT GCTGGTGCCG
ATGGCCGAGG ATGCGAAAGA GGCGCTGGCC TCGATGGGCG ACGACACGCC GCCCGCGGTG
CTGTCGCGCC AGTTCCGGCC GCTGTCGCAT TACTTCCGGC AGAACTTCAG CCAGGTCACC
AACCCGCCCA TCGACAGCTT GCGCGAAAGC CGGGTGATGA GCCTGCGCAC CCGTTTCGGC
AACCTCAAGA ACGTGCTTGA GGAAAGCTCG ACCCATGCCG AGATCACCAT GCTGGAAAGC
CCCTTCCTCG CCAATGGCGA GTTCGAGGAA CTGACCCGCA TGTTCGAGGG CCAGGCGACG
CAGATCGACT GCACCTTCCC GGTCGATGGC GGCTCGGATG CCCTGGGCGA TGCGCTGGCG
CGCATCCGCG CCGAGGCCGA GGATGCCGTG CGCTCGGGCA ACGGCCATAT CATCCTGACG
GACGAGGGCA TCTCGGCCAG CCGCATCGGC GTGCCGATGA TCCTGGCGAC CAGCGCGGTG
CATAGCTGGC TGACCCGCAA GGGGCTGCGG ACCTTCTGCT CGCTGAACGT GCGGGCCTCG
GAATGCGTGG ATCCGCATGA TTTCGCGGTG CTGATCGGCT GCGGCGCGAC CACGGTGAAC
CCCTATCTGG CGCAGGACAC GCTGGCCGAG CGCATCGAGC GCGGCCTGCT GGACGGCAAC
CTCATCGACA TCATGACCCG CTATCGCGAA GCCATCGACG CGGGCCTGCT GAAGATCATG
GCCAAGATGG GCATTTCGGT CCTGTCCTCC TATCGCGGCG GGCTGAACTT CGAGGCGGTG
GGGCTGTCGC GCGCCATGGT GGCCGAGTAT TTCCCCGGCA TGCAGTCGCG CATCTCGGGC
ATCGGCCTGC ACGGGCTGCA AGCCAAGCTG GAAGAGGCCC ATGCCAAGGG CTTCGGCGCG
GCCCTGGTCG ATCTTCTGCC GGTGGGCGGC TTCTTCAAGG CCCGCCGCTC GGGCGAAAAG
CATGCCTGGG AAGCCAATAC CATGCGGCTT TTGCAGCTGG CCTGCGAAAA GGCGTCCTAC
GACATCTGGA AGCAGTTCAC CGCCACCATG CGGGCGAACC CGCCGATCCA TATCCGCGAC
CTTCTGGACA TCAAGCCCCT GGGCAAGCCG GTGCCCATCG AGGAAGTGGA ATCGATCACC
TCGATCCGCA AGCGCTTCGT GACGCCAGGC ATGTCGTTGG GGGCGCTGTC GCCCGAGGCG
CACATGACGC TGAACATCGC CATGAACCGG ATCGGCGCCA AGTCCGATTC CGGCGAGGGC
GGCGAGGACC CGGCGCATAG CCACCCGCTG CCCAACGGCG ACAACCCCTG CGCCAAGATC
AAGCAGGTCG CCTCGGGCCG CTTCGGCGTC ACCGCCGAAT ACCTGAACGC CTGCGAGGAA
CTGGAGATCA AGGTCGCGCA AGGCGCCAAA CCCGGCGAGG GCGGCCAGCT GCCCGGCATG
AAGGTCACCG ACCTGATCGC CCGGCTGCGC CACTCGACCA AGGGCGTGAC GCTGATCTCG
CCGCCGCCGC ATCACGACAT CTACTCGATC GAGGATCTGG CGCAGCTGAT CTACGACCTC
AAGCAGATCA ACCCGCGCGC CAAGATCACC GTGAAGCTGG TGGCGTCCTC GGGCGTCGGC
ACCATCGCGG CGGGCGTCGC CAAGGCCAAG GCCGACGTGA TCCTGATCTC GGGCCACAAC
GGCGGCACCG GGGCCAGCCC GGCGACCTCG ATCAAGTTCG CCGGCCTGCC CTGGGAGATG
GGGCTGACCG AGGCGCATCA GGTGCTGGCG ATGAACCGGC TGCGGGATCG CGTCACCTTG
CGCACCGACG GGGGCCTGCG CACCGGCCGC GACATCGTCA TGGCGGCGAT GATGGGGGCC
GAGGAATACG GCATCGGCAC CGCCGCGCTG ATCGCCATGG GCTGCATCAT GGTGCGCCAG
TGCCAGTCGA ACACCTGCCC GGTGGGCGTC TGCACCCAGG ACGAAAAGCT GCGCGCCATG
TTCAACGGCT CGGCCGACAA GGTGGTGAAC CTGATCACCT TCTACGCCAC CGAGGTGCGC
GAGATCCTGG CCAGCATCGG GGCGCGCAGC CTTGACGAAG TGATCGGGCG GGCCGACCTG
CTGACCCAGG TCAGCCGGGG CGACAAGTCG CTGGACGACC TGGACCTGAA CCCGCTGCTG
ATCACCGTCG ATGGCTCGGA AAAGATCGTC TATGACCGTT CGAAACCGCG CAACGCGGTG
CCCGACACGC TGGACGCCGA GATCATCCGC GACGCCGGCC GCTTCTTCTC GGATGGCGAG
AAGATGCAGC TTTCCTATGC GGTCAGGAAC ACCCAGCGGA CGGTGGGCAC GCGCACCTCG
TCGATGATCG TGCAGACCTT CGGCATGCGC AACACGCTGC AACCCGATCA CCTGACCGTG
CGGCTGACCG GCAGCGCGGG CCAGTCGCTG GGCGCATTCG CCGCGCCGGG GCTGAAGATC
GAGGTCTCGG GCGATGCCAA CGACTATGTC GGCAAGGGCC TGTCCGGCGG CACCATCGTC
GTTCGCCCGC CCATGGGCAG CCCGCTGAAC GCGGCCGAGA ACACCATCAT CGGCAATACC
GTGCTTTACG GCGCTTCCGA CGGCTATCTG TTCGCGGCCG GTCGCGCGGG CGAGCGTTTT
GCGGTCCGCA ACTCGGGCGC CAAGGTGGTG ATCGAGGGTT GCGGCTCGAA CGGCTGCGAA
TACATGACCG GCGGCGTCGC CGTGATCCTA GGCCGGATCG GCGCCAATTT TGGTGCCGGC
ATGACCGGGG GCATGGCCTA TCTCTACGAC CCCGAGGGCC TGGCACGCGA CTATATCAAC
GACGAGACGC TGGTCCTGTG CCCGGTGACG CAGGCGCATT GGGAAGAGCA GCTGCGGGAT
CTGATCGAAC GGCATCACAG GGAAACCCGC TCGCGCCGGG CCGAGGAGAT TCTGCAAAAC
TGGGAGGACG AGAAGGCGAA CTTCCTGCAA GTCTGTCCCA AGGAGATGCT GCCGCATCTG
AAGCACCCCA TCGCCCCGGT CGAGGACCTG GCGGCGGTGC CGGCCGAGTG A
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| Protein sequence | MKDSDMTGWE QQEQARRDWM AEHSLYRAED EHSSCGVGLV VSIDGKISRK VVESGINALK
AIWHRGAVDA DGKTGDGAGI HVQIPVPFFY DQVRRTGHEP DHDKLIAVGQ VFLPRTDFAA
QERCRTIVES EVLRMGHYIY GWRHVPVNTA VLGEKANATR PEIEQILIRC DKDIDDEQFE
RELYIIRRRI EKAAVAAQIA GMYICTLSCR SIIYKGMMLA EQVAEFYPDL KDERFESAFA
IYHQRYSTNT FPQWWLAQPF RMLAHNGEIN TLKGNSNWMR SHEIRMASRT FGEMAEDIKP
IIPGGSSDSA ALDAVFEVLV RSGRNAPMTK TILVPEAWSK ATTDMPRAWA DMYAYCNSIM
EPWDGPAALA MTDGRWVCGG LDRNGLRPLR YVVTGDNLLI AGSEAGMVPI NETAVREKGA
LGPGQMIAVD MAEGKLYHDR EIKDHLAASQ PFGDWVEKVV QPSELMAKLP ETALHDGEEL
RRRQIAVGYT VELVEQMLVP MAEDAKEALA SMGDDTPPAV LSRQFRPLSH YFRQNFSQVT
NPPIDSLRES RVMSLRTRFG NLKNVLEESS THAEITMLES PFLANGEFEE LTRMFEGQAT
QIDCTFPVDG GSDALGDALA RIRAEAEDAV RSGNGHIILT DEGISASRIG VPMILATSAV
HSWLTRKGLR TFCSLNVRAS ECVDPHDFAV LIGCGATTVN PYLAQDTLAE RIERGLLDGN
LIDIMTRYRE AIDAGLLKIM AKMGISVLSS YRGGLNFEAV GLSRAMVAEY FPGMQSRISG
IGLHGLQAKL EEAHAKGFGA ALVDLLPVGG FFKARRSGEK HAWEANTMRL LQLACEKASY
DIWKQFTATM RANPPIHIRD LLDIKPLGKP VPIEEVESIT SIRKRFVTPG MSLGALSPEA
HMTLNIAMNR IGAKSDSGEG GEDPAHSHPL PNGDNPCAKI KQVASGRFGV TAEYLNACEE
LEIKVAQGAK PGEGGQLPGM KVTDLIARLR HSTKGVTLIS PPPHHDIYSI EDLAQLIYDL
KQINPRAKIT VKLVASSGVG TIAAGVAKAK ADVILISGHN GGTGASPATS IKFAGLPWEM
GLTEAHQVLA MNRLRDRVTL RTDGGLRTGR DIVMAAMMGA EEYGIGTAAL IAMGCIMVRQ
CQSNTCPVGV CTQDEKLRAM FNGSADKVVN LITFYATEVR EILASIGARS LDEVIGRADL
LTQVSRGDKS LDDLDLNPLL ITVDGSEKIV YDRSKPRNAV PDTLDAEIIR DAGRFFSDGE
KMQLSYAVRN TQRTVGTRTS SMIVQTFGMR NTLQPDHLTV RLTGSAGQSL GAFAAPGLKI
EVSGDANDYV GKGLSGGTIV VRPPMGSPLN AAENTIIGNT VLYGASDGYL FAAGRAGERF
AVRNSGAKVV IEGCGSNGCE YMTGGVAVIL GRIGANFGAG MTGGMAYLYD PEGLARDYIN
DETLVLCPVT QAHWEEQLRD LIERHHRETR SRRAEEILQN WEDEKANFLQ VCPKEMLPHL
KHPIAPVEDL AAVPAE
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