Gene Pden_0485 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_0485 
Symbol 
ID4579102 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp454815 
End bp455108 
Gene Length294 bp 
Protein Length97 aa 
Translation table11 
GC content61% 
IMG OID639767801 
ProductXRE family transcriptional regulator 
Protein accessionYP_914293 
Protein GI119383237 
COG category[K] Transcription 
COG ID[COG2944] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGGAA AGGAAATGAG CACGTTTGGC GAAGATCTGA TCCAGGCCAT GGGCGAGGCA 
CTGGCCCATG CCAAGGGAGA AGGCACCGCA ATTCTGCACG AGCCGGTCGA TCCGCGAGAG
GTCAGGATGC GGGCGAAGCT GACGCAGGCG CAAATGGCCC CGTTGATGGG AATGAGCCTT
TCGGGGTATC GAAAATGGGA ACAGGGTCAG CGTCGCGTCT CTGGTCCTGC TGCCACGCTG
CTGCGGGTGA TCGAGAAAGA GCCCGGTGCG GTGCAACGTG CCTTGGCGGG TTGA
 
Protein sequence
MEGKEMSTFG EDLIQAMGEA LAHAKGEGTA ILHEPVDPRE VRMRAKLTQA QMAPLMGMSL 
SGYRKWEQGQ RRVSGPAATL LRVIEKEPGA VQRALAG