Gene Pden_0470 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_0470 
Symbol 
ID4580041 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp440577 
End bp441365 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content63% 
IMG OID639767786 
ProductGntR family transcriptional regulator 
Protein accessionYP_914278 
Protein GI119383222 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCAGA ATCTTTCACC CACACCACGC AAGCGCCGTC CGGGCGGCGG GCGCAAGCAG 
GTGGCGGCGC CGAGCCTGCC GGTTCTGGCA AGCGGTGATG AGGAGACGCT GGCGCAAAAG
GTCTATGATG CCTTGCAGGC AGGATTGATG GCGGGCAGCA TCGAGCCGGG AATGCCTTTG
ACCGTGCGAT CATTGTCGCA GGTCATGGGG GTCAGCGCGA CCCCGGTTCG CGAGGCGCTC
AAACTGCTGG AAGCCGATGG CGTGCTGGAG GCCCGCAACA AGAGCGCATT CTATGCCCGT
GAATTGGGCA GCGAAGAGAT GCGGCAGGTG CTGGACATGC GTCTTGCGCT GGAGGGGTTG
GCGGTCCGCC GGGCTGCCTT GGCGGTCGGG CCGGACGATC TGGACAGGAT CTCGCGGCTG
AACGATCATT ATGCAACCGC GCTGCGCGCC GCGGGGGACA ACGGCCCATT GATCCTGGAA
CGCAATCACC AGTTTCATTT TGCCATCTAC GCGCTTTGCG GCTCGCCGAT CCTGCTGCAG
ACCATCGAGA CGATGTGGCT GCGGATCGGC CCAACCCTGC ATCTCTACAT TGACGCGGGC
GGCATGGACG GGGATTTCCC GCGCTATCAC GAGGACATGA TCGATGCGCT GCGCGAGCGG
GATGCCGATG CCGCCGAAGC TGCCCTGCGC GATGACCTGA TTGCTGCCGC CCGCAAGATC
CTGCGCCTGC AGGCGTCTGA GACAACAGGC AATCGGCAGC CCTATATCCT CGAAAACGTC
GATCTCTGA
 
Protein sequence
MQQNLSPTPR KRRPGGGRKQ VAAPSLPVLA SGDEETLAQK VYDALQAGLM AGSIEPGMPL 
TVRSLSQVMG VSATPVREAL KLLEADGVLE ARNKSAFYAR ELGSEEMRQV LDMRLALEGL
AVRRAALAVG PDDLDRISRL NDHYATALRA AGDNGPLILE RNHQFHFAIY ALCGSPILLQ
TIETMWLRIG PTLHLYIDAG GMDGDFPRYH EDMIDALRER DADAAEAALR DDLIAAARKI
LRLQASETTG NRQPYILENV DL