Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_0470 |
Symbol | |
ID | 4580041 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008686 |
Strand | + |
Start bp | 440577 |
End bp | 441365 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 639767786 |
Product | GntR family transcriptional regulator |
Protein accession | YP_914278 |
Protein GI | 119383222 |
COG category | [K] Transcription |
COG ID | [COG1802] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGCAGA ATCTTTCACC CACACCACGC AAGCGCCGTC CGGGCGGCGG GCGCAAGCAG GTGGCGGCGC CGAGCCTGCC GGTTCTGGCA AGCGGTGATG AGGAGACGCT GGCGCAAAAG GTCTATGATG CCTTGCAGGC AGGATTGATG GCGGGCAGCA TCGAGCCGGG AATGCCTTTG ACCGTGCGAT CATTGTCGCA GGTCATGGGG GTCAGCGCGA CCCCGGTTCG CGAGGCGCTC AAACTGCTGG AAGCCGATGG CGTGCTGGAG GCCCGCAACA AGAGCGCATT CTATGCCCGT GAATTGGGCA GCGAAGAGAT GCGGCAGGTG CTGGACATGC GTCTTGCGCT GGAGGGGTTG GCGGTCCGCC GGGCTGCCTT GGCGGTCGGG CCGGACGATC TGGACAGGAT CTCGCGGCTG AACGATCATT ATGCAACCGC GCTGCGCGCC GCGGGGGACA ACGGCCCATT GATCCTGGAA CGCAATCACC AGTTTCATTT TGCCATCTAC GCGCTTTGCG GCTCGCCGAT CCTGCTGCAG ACCATCGAGA CGATGTGGCT GCGGATCGGC CCAACCCTGC ATCTCTACAT TGACGCGGGC GGCATGGACG GGGATTTCCC GCGCTATCAC GAGGACATGA TCGATGCGCT GCGCGAGCGG GATGCCGATG CCGCCGAAGC TGCCCTGCGC GATGACCTGA TTGCTGCCGC CCGCAAGATC CTGCGCCTGC AGGCGTCTGA GACAACAGGC AATCGGCAGC CCTATATCCT CGAAAACGTC GATCTCTGA
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Protein sequence | MQQNLSPTPR KRRPGGGRKQ VAAPSLPVLA SGDEETLAQK VYDALQAGLM AGSIEPGMPL TVRSLSQVMG VSATPVREAL KLLEADGVLE ARNKSAFYAR ELGSEEMRQV LDMRLALEGL AVRRAALAVG PDDLDRISRL NDHYATALRA AGDNGPLILE RNHQFHFAIY ALCGSPILLQ TIETMWLRIG PTLHLYIDAG GMDGDFPRYH EDMIDALRER DADAAEAALR DDLIAAARKI LRLQASETTG NRQPYILENV DL
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