| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_0458 |
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| Symbol | |
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| ID | 4580030 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | + |
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| Start bp | 426466 |
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| End bp | 428598 |
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| Gene Length | 2133 bp |
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| Protein Length | 710 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 639767775 |
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| Product | integrase catalytic subunit |
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| Protein accession | YP_914267 |
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| Protein GI | 119383211 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.540763 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAACACT TCAACATCAA TCTCCTCGAT CTCGTCATCC TTGATGGCGT GGAATATCGG
CTTGCATCGC ATGAGCCCGA AGGAATCGTG CTGATCGGAA CAGCGCCACC GCACCCTGCA
CGCAGCATCA GCCATGGCGA GCTGGAGGAA CTGCTTCGCA GCCCGCGGTT TCGCTACATT
CCGCAGGGGG CGGCACGCAC AGCCGCGGAG CGCAACCTTG ACGGACTCCC CGAATATTTT
CGAGATCTTC CCGAGGGCAA GCAAGAGACC GCGCTGTGGC GACTATTGTT CGTCGAGGAG
TTGCTGCGCT GCATCAAGGC CGGGCTGGCC AGGCGAAACG AGGCCTCGGT CAACATCATT
CTGCCAGCAG TTATCGCTGC CGTAGAAAGT CATATGCGCA AGCGCTTTCG CAAACGGTTC
AAGCGCGCGG GGCGTATGGA AACCTCTCGA ACGCCGCCTT GCGCCAAGAC GTTGCTGACC
TGGACACGCG CCTACGAAAG AAGCGGCTTC AGCATCATGG CTCTGGTGCC TCAGACGCAT
CGATGCGGAG GCAGAGGCCA GATGCTGCCC GGCGAGCTTG CGGCATTTGA TGCGCTGATC
GCGGAATACG CCTCGCCGCT GCGCCAGACC ATCGATCAGA TCCACGAGCG CGCGACCAAC
TTCTACGCGG ATTTCAACCG CGACCGTGCT GAGCGGGGGT TGCCCGAACT CCGGCCGCCA
TCCCGCTCCA CCGTCTATCG CGCGATCAAG CGGATGGACC CCTACGAGAC CTACCTGCAA
CGGTGGGGTG TCGATGCCGC CAACAAGAAA TTCGCGATCA TCGAATATGG CGTGCAGGTC
CTGCGGCCCA TGGAACGGGT CGAGATCGAC GAATGGGATG TCGACCTCAT GGCATGGGTT
TCCAATGCCG GTCTTCTCGA CCGGCTGACG ACGCAGCAGA TCGCGGCCCT CGAGGTGATC
CGCCTTGTCA TCTGCGTCGC CATCGACTGT GCCACGCGTT GCGTCGTCGG TCTCACCCTG
TCCAGATCGA CCAGTGCCGA AGCGGCCATC CGCACGATGG AAACGGTCAC GATTGACAAG
ACGGCTATCG CGGTCGGCCT TAGCTGTCGT CACGGTTGGC ACCAGGGTGG GCGGCCCGAG
ACCGTCGCAG CCGACATGGG CTCAGCCTTC GTCAGCGATG ATTTCAAGAT CACCTGCGCC
GGGTTGCTTG CCCGTCTGGT CAATCCACCC GGCGGTGTGG CCAAGCTCCG GTCTCGCATC
GAACGCCTGT TCGGGACCTT TGCAACGCAT TTCGTCAGTC GATTCCGGGG GCGGACATTC
TCGAACCCCG AGCAGCGGGG CGATTATGAT GCCGAAGCCG AAGCCTCTCT TACCGATCAG
GACCTGCTGG CGGCGCTCGT GACCTATATC GTGGACGTCT ATCACCAGCG CCCTCACGCC
GGGCTTCAGG GTGAGACCCC TGCCGATTGC TGGGACCGGC TGGTGGCCAA ATATGGCCTT
CCGGCCCCGG TCGATGCGAT GGATCGCCGG GCGATCTTCG GCATTGAGCT GGAACGCAGC
ATTTCCGGTC GCGGCGTGCG GGTGTTCGGC GCGGACTTCG CCTGCGAACA GCTGCGCGAT
GCCCGCAAGC ACAGCCATCA GCACAAGGCC CGGCTGCGGT TCGATCCACT TGACCTTGGC
TGGGTCGCGG TCGAGGTCGG CGGAATCTGG TATCCCGCCC ATGACCTGTC CGGGGCGCTT
TCGGGCGTTT CCTTCTACCA GTGGTCGGCC TTCGCCAGGA CCGTCATGGA TCACAACCGC
GAACGCGCGG CAATCTCCGC CGAAATCTTC CATGACGGGC TGCGCCGGCT CGATTTGCTT
TCCATCGAGG CGGCCAACGC CGCGCAGCTT GGGCGGATGA CGTTCACCGC CGAGGAGATC
GACAGGGCGG AACAGACACT CGGTCTTGGC CTGCACCTGC TGCCCGCTGC GTCGGTCGGT
CAGGCCCAGG CCGGCTCGGA TTGGCTGCAG GGCGGGTTTG AGGTCGGGGG CAGCGAGGCA
GATGATGCTG AGGTGCCACC CGCACCGGAG GACCCTCCTG CGGATGACAC CCCGCCATCG
CGCAAGGGCT GGAGGTTCGA AGATGACGAA TGA
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| Protein sequence | MKHFNINLLD LVILDGVEYR LASHEPEGIV LIGTAPPHPA RSISHGELEE LLRSPRFRYI
PQGAARTAAE RNLDGLPEYF RDLPEGKQET ALWRLLFVEE LLRCIKAGLA RRNEASVNII
LPAVIAAVES HMRKRFRKRF KRAGRMETSR TPPCAKTLLT WTRAYERSGF SIMALVPQTH
RCGGRGQMLP GELAAFDALI AEYASPLRQT IDQIHERATN FYADFNRDRA ERGLPELRPP
SRSTVYRAIK RMDPYETYLQ RWGVDAANKK FAIIEYGVQV LRPMERVEID EWDVDLMAWV
SNAGLLDRLT TQQIAALEVI RLVICVAIDC ATRCVVGLTL SRSTSAEAAI RTMETVTIDK
TAIAVGLSCR HGWHQGGRPE TVAADMGSAF VSDDFKITCA GLLARLVNPP GGVAKLRSRI
ERLFGTFATH FVSRFRGRTF SNPEQRGDYD AEAEASLTDQ DLLAALVTYI VDVYHQRPHA
GLQGETPADC WDRLVAKYGL PAPVDAMDRR AIFGIELERS ISGRGVRVFG ADFACEQLRD
ARKHSHQHKA RLRFDPLDLG WVAVEVGGIW YPAHDLSGAL SGVSFYQWSA FARTVMDHNR
ERAAISAEIF HDGLRRLDLL SIEAANAAQL GRMTFTAEEI DRAEQTLGLG LHLLPAASVG
QAQAGSDWLQ GGFEVGGSEA DDAEVPPAPE DPPADDTPPS RKGWRFEDDE
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