| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_0440 |
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| Symbol | |
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| ID | 4578843 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | + |
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| Start bp | 409050 |
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| End bp | 410171 |
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| Gene Length | 1122 bp |
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| Protein Length | 373 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639767757 |
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| Product | 3-isopropylmalate dehydrogenase |
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| Protein accession | YP_914250 |
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| Protein GI | 119383194 |
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| COG category | [C] Energy production and conversion
[E] Amino acid transport and metabolism |
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| COG ID | [COG0473] Isocitrate/isopropylmalate dehydrogenase |
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| TIGRFAM ID | [TIGR00169] 3-isopropylmalate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.506295 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGACCT ATTCCCTGCT GATCCTGCCC GGCGACGGCA TCGGCCCCGA GGTCATGGCC
GAGGTGCGCA AGGTCATCGG CTGGTTCGAA AAGAGCCGCG GCCTGTCCTT CGACGTCAGC
GAGGATCTGG TCGGCGGCGC GGCCTACGAC AAATACGGCA AGCCTCTGGC GGACGAGACC
ATGGCCAAGG CGCAGGCGGT CGATGCGGTG CTGCTGGGCG CCGTCGGCGG GCCGAAATAC
GACAATCTCG ACTTTTCGGT GAAGCCCGAG CGCGGGCTGC TGCGCCTGCG CAAGGAAATG
GACCTGTTCG CCAACCTGCG CCCCGCGCAA TGCTTCGACG CGCTGGCCGA TTTCAGCTCG
CTCAAGCGCG AGGTGGTCGC GGGCCTCGAC ATCCTGATCG TGCGCGAGTT GACCTCGGGC
GTCTATTTCG GCGAGCCGCG CGGCATCCAT GCCGACGACA ACAACCCCGA CAACGAGGGC
GGCCGCGTCG GCGTGAACAC CCAGCGCTAT ACCAGCGGAG AGATCCGCCG CGTCGCGCGC
TCGGCCTTCG AGCTGGCCCG CAAGCGCAGC AACCGCGTCT GCTCGATGGA AAAGGCCAAT
GTGATGGAAT CCGGCATCCT CTGGCGCGAA GAGGTGCAAT GGGTGCATGA CAACGAATAT
CCCGATGTCG AGCTGTCGCA CATGTATGCC GACAACGGCG CCATGCAGTT GGTGCGCAAC
CCGCGCCAAT TCGACGTGAT CGTGACCGAC AACCTGTTCG GCGACATCCT GTCGGATGCG
GCGGCGATGC TGACCGGCAG CCTGGGCATG CTGCCCTCGG CCAGCCTTGG CGCGCCGATG
GCGAACGGCC GGCCCAAGGC GCTTTACGAG CCGGTGCATG GCTCGGCCCC CGACATCGCC
GGGCAGGGCA AGGCCAACCC GATCGCCTGC ATCCTCAGCT TCGCCATGTG CCTGCGCTAT
TCCTTCGGCC TGGGTGCCGA GGCCGATCTG CTGGAAAAGG CCGTCGAGAG GGTGCTGGCC
GACGGCGTGC GCACCGGCGA CCTGATGGGC GCCGAGGGCG GCAAGCCGGT CTCGACCGCC
GAGATGGGCG ACCACATCGT CGCGGCGCTT TCGGCGCTGT AA
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| Protein sequence | MTTYSLLILP GDGIGPEVMA EVRKVIGWFE KSRGLSFDVS EDLVGGAAYD KYGKPLADET
MAKAQAVDAV LLGAVGGPKY DNLDFSVKPE RGLLRLRKEM DLFANLRPAQ CFDALADFSS
LKREVVAGLD ILIVRELTSG VYFGEPRGIH ADDNNPDNEG GRVGVNTQRY TSGEIRRVAR
SAFELARKRS NRVCSMEKAN VMESGILWRE EVQWVHDNEY PDVELSHMYA DNGAMQLVRN
PRQFDVIVTD NLFGDILSDA AAMLTGSLGM LPSASLGAPM ANGRPKALYE PVHGSAPDIA
GQGKANPIAC ILSFAMCLRY SFGLGAEADL LEKAVERVLA DGVRTGDLMG AEGGKPVSTA
EMGDHIVAAL SAL
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