Gene Pden_0433 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_0433 
Symbol 
ID4579479 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp402332 
End bp403354 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content70% 
IMG OID639767750 
Productbeta-lactamase domain-containing protein 
Protein accessionYP_914243 
Protein GI119383187 
COG category[R] General function prediction only 
COG ID[COG0491] Zn-dependent hydrolases, including glyoxylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0151814 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATACGCA GCGAAGCACA TAACCCCCCG GCCGAGGGCG AGGCGCATGA GATCGCCCCC 
GGCGTGTTCT GGTTCCAGCT TCCCCTGCCC TTCAAGCCCG ATACGGTCAA CGCCTATGCC
TTTCGCGACG CGGATGGCTG GACGGTTGTG GATACCGGCC TGGACACCCG CCGCACCCGA
GCCATCTGGC AGGGCATCCT GCAAGGGCCG CTGGCCGGCG CCCCGGTCGT CCGGCTGATC
GCCACCCATC ACCACATCGA CCATATCGGC CTGGCCGGCT GGTTCCAGGC GCAGGGGGCC
GAGCTTTGGA CCTCGCGCGC GTCCTGGCTG ATGGCACGGA TGGGCATTCT CGACGTGCAG
GAACGCCCGA CGCCGCAGGC CGTCGCCTTC TGGCGCCAGG CCGGCATGCC GCCCGAACTG
CTGGACGAGC GCAGCCACGA GCGTCCCTTC AACAGCGCCG ATGTCTGCGC GCCGCTGCCG
CCCGGCTATC GCCGGCTGTC CGAGGGCCAA CAGGTGACGT TCGGCGAGCG GCGCTGGGTC
GTGCGCATGG GCCATGGCCA CGCGCCGGAA CATGTCACGC TGTGGTCGCT GGACGACGAC
CTGGTGATCG GCGGCGACCA GATGCTGGCG ACGATCTCGC CCAATCTCGG CGTCTATCCG
ACAGAGCCCG AGGCCGATAC CGTCGGCGAC TGGCTGGAAA GCTGCGACCG GCTGGCGGAA
TACGCCCGGC CCGAACAACT GGTCCTGCCC GGGCACAAGC TGCCCTATCG CGGCCTGCCG
ACCCGGCTGC GCCAGCTGGC CACCAACCAG CGCGCCGCGC TGGATCGGAT GCTGGAAGGG
CTGCGGCAGG AACCGCTCAG CACCGTGGGC TGCTTCCCGC TGCTGTATCG CCGCCAGATC
GCCAAGCCGG AATTCGGCCT CGCGCTGGCC GAGGCGGTCG GGCATGTCAA CCACCTGCGC
GCGACCGGCC AGGTGTGGCC GGTGGGCAAG ACCGAGACCG GCGCGGTGCT TTGGGGGGCG
TGA
 
Protein sequence
MIRSEAHNPP AEGEAHEIAP GVFWFQLPLP FKPDTVNAYA FRDADGWTVV DTGLDTRRTR 
AIWQGILQGP LAGAPVVRLI ATHHHIDHIG LAGWFQAQGA ELWTSRASWL MARMGILDVQ
ERPTPQAVAF WRQAGMPPEL LDERSHERPF NSADVCAPLP PGYRRLSEGQ QVTFGERRWV
VRMGHGHAPE HVTLWSLDDD LVIGGDQMLA TISPNLGVYP TEPEADTVGD WLESCDRLAE
YARPEQLVLP GHKLPYRGLP TRLRQLATNQ RAALDRMLEG LRQEPLSTVG CFPLLYRRQI
AKPEFGLALA EAVGHVNHLR ATGQVWPVGK TETGAVLWGA