| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_0424 |
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| Symbol | |
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| ID | 4579470 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | - |
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| Start bp | 394384 |
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| End bp | 396312 |
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| Gene Length | 1929 bp |
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| Protein Length | 642 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 639767741 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_914234 |
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| Protein GI | 119383178 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4785] Lipoprotein NlpI, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGATCGCAG CCGGGCACGC CGCGCCAGCC GCGGCGTTGC CCATCGGCGC TGCGGCGGCT
AGGGTCGCTG GCGCAATCGC CGAGACATGG GCCCAAGCCG TGACCACAAG ACTGATCCCG
CTGGCGCTGA TCGCGCTGCT GCCGCTGCTG CAAGGGCCCG CCATGGCCGC GCCTTCGCTG
GCCCAGGCCC AGGACCCCGC CGCCGGGAAC AGCGAGCGGC CGGCGCATCG CCCGGTCGAT
GCCGCGCCGG ACCTGCGCGG CCTCTCCGGC CCCTATCTGG CCGCGCGCAT GGCCGCGATC
CAGAACGACT ATTCCGTGGC CGCCCGCTAT TACCTCCAGG CGCTGGCCCA TGACGACAGC
GACCCCTTCC TGCAAGACAG CGCGCTGGTC GCGCTGATCT CGGCCGGCGA GATGGAGCGT
GCCGCCGCGC TTTCCGGCAC CATGTCCGAC CAGGGCCGCG CCACCGAGCT GGCCCGGCTG
GTGCAGCGCG CCGAGATGGC CCGGGCCGGG CGCTGGGACG CGCTGATCGA GGCCATCGAC
TCCGCGCCCT CGCCCGGGGG CAACGCCACC CCCGGCGGCG GCATTCTGGT CGACGGCATG
ATGCGCGCCT GGGCGCTGCT GGGCGCCGGA AAGGCCGGCG AATCGCTGAC CGCGTTCAAG
AAGCTGGCCG AATTGCGCGG CGCAGCGCCG ATGGTGAACT ACCACCTGGC CCTCGCCAAG
GCGCGGGTCG GCGATTTCGA GGGCGCCGAG CTTCTGCTGG CCGATCCGGC CACCGGCGCG
CATATCCTGG GCGTCATCGC CCGCGCCCAG GTGCTGTCGC AACTGGAACG CAACCGCGAC
GCCATCGCCA TGCTCGAGGC GACGCCCGGC TTTGCCGAGG AGCCCTATCT GGTGGCGCTG
CGCGACCGCA TGAAGCGGGG CGAGACGCTG CCCTTCGATT CGGCGCGCGG CCCCGCCGAC
GGCATGGCGC AGGTATTCCT GACCTTCGGC TCGGTGCTGG CGACAAGCGA CGAGCCCGAT
CCGCTGGCGC TGATCCATGC CCGGCTGGCC GAATACCTGG CCCCCGACCT GGGCGAGGCG
CGGCTCTTGT CCGCCCAGCT CCTGCAGGGC TTCGGCCAGT TCGACCTGGC CGAGCACGAA
TTCGAGGCCC TGCGCGAGCT TGGCGACATG CGGCCCGTCG CCGAACTGTC GCGCATCGAC
GCCCTGGCCC GCGCCGAGCG GCTGAACGAT GCCGAAAAGG CCGCGCTGGC GCTGACCGCC
GCCCATCCCG AACTGGCCCA GGGCTGGATC GCGCTTGGCG ACATGCTGCG CCAGCAGGAC
AAGTTCGGCC AGGCGGTCCC GGCCTATGAC AAGGCGCTGA GCCTGATCGG CGACAAAATC
CCCGAGGCGC GCTGGTTCCC GCTTTACGCC CGCGGCATTG CGCTGGAACG GTCGGGGCAG
TTCTCCAAGG CCGAGGCGGA TTTCCGCGCC GCGCTGAAGA TCCGCCCGGA TTCGGCGCAA
GTGCTGAACT ATCTGGGCTA CAGTCTCGTG GACCGCAGCG AAAAGCTGGA CGAGGCGCTG
GCGCTGATCC AGCGCGCGGT CGAGCTGCGC CCGGACGACG GCTATATCCT CGATTCGCTG
GCCTGGGCCT ATTTCCGCCT CGACCGCTAT CCCGAGGCCG TGGCGCCGAT GGAGCGCGCC
GTGGCGGCCA TGCCGGGCGA TCCGCTGGTC AACGACCATA TGGGCGACAT CTACTGGATG
GTCGGCCGCA AGCGCGAGGC CGAGATCCAG TGGCACCGCG CCCTGTCGCT GAAGCCGGAA
ACCGAGGCCG AGGTGCACCG CATCCGCGCC AAGCTGGAAC GCGGCCTCGA TGCCGTGCTC
GAGGAGGAAA AGGCCAACGG CGGCAAGCTG CCCGAGGTCC GCGCCCCGGA ACCCGCCAGG
GCCGACTGA
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| Protein sequence | MIAAGHAAPA AALPIGAAAA RVAGAIAETW AQAVTTRLIP LALIALLPLL QGPAMAAPSL
AQAQDPAAGN SERPAHRPVD AAPDLRGLSG PYLAARMAAI QNDYSVAARY YLQALAHDDS
DPFLQDSALV ALISAGEMER AAALSGTMSD QGRATELARL VQRAEMARAG RWDALIEAID
SAPSPGGNAT PGGGILVDGM MRAWALLGAG KAGESLTAFK KLAELRGAAP MVNYHLALAK
ARVGDFEGAE LLLADPATGA HILGVIARAQ VLSQLERNRD AIAMLEATPG FAEEPYLVAL
RDRMKRGETL PFDSARGPAD GMAQVFLTFG SVLATSDEPD PLALIHARLA EYLAPDLGEA
RLLSAQLLQG FGQFDLAEHE FEALRELGDM RPVAELSRID ALARAERLND AEKAALALTA
AHPELAQGWI ALGDMLRQQD KFGQAVPAYD KALSLIGDKI PEARWFPLYA RGIALERSGQ
FSKAEADFRA ALKIRPDSAQ VLNYLGYSLV DRSEKLDEAL ALIQRAVELR PDDGYILDSL
AWAYFRLDRY PEAVAPMERA VAAMPGDPLV NDHMGDIYWM VGRKREAEIQ WHRALSLKPE
TEAEVHRIRA KLERGLDAVL EEEKANGGKL PEVRAPEPAR AD
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