| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_0416 |
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| Symbol | gyrB |
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| ID | 4579462 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | - |
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| Start bp | 386880 |
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| End bp | 389318 |
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| Gene Length | 2439 bp |
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| Protein Length | 812 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639767733 |
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| Product | DNA gyrase subunit B |
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| Protein accession | YP_914226 |
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| Protein GI | 119383170 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit |
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| TIGRFAM ID | [TIGR01059] DNA gyrase, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGAAC CCGCCCCCCA GACCTCCGAC TACGGCGCCG ATTCCATCAA GGTTCTCAAG
GGCCTGGAAG CGGTGCGCAA GCGCCCCGGC ATGTATATCG GCGATACCGA CGACGGCTCG
GGCCTGCACC ACATGGTCAC CGAGGTCGTG GACAACGGCA TCGACGAGGC GCTGGCCGGT
CATGCCGACT TCGTGCGGGT GAAAATCCAT GCCGATGGCA GCGTCTCGGT ACGCGACAAC
GGCCGCGGCA TCCCGGTGGA CATGCACCCG ACCGAGGGGG TCAGCGCAGC CGAGGTCATC
ATGACCCAGC TGCATGCCGG CGGGAAGTTC GACCAGAACA GCTACAAGGT CTCGGGCGGC
CTGCATGGCG TCGGCGTTTC GGTCGTCAAC GCGCTGTCGG ACTGGCTGGA GCTGCGCATC
TGGCGCGGCG GCAAGGAGCA CTACGCCCGG TTCGAGAACG GCGACACGGT CGAGCACCTG
CGCGTGGTCG GCGATGCCGA GCCGGGCGAA AAGGGCACCG AAGTGCGCTT CCTGGCCTCG
TCCAAGGAGG ATCGGCCGGA CGGCACCTTC CTGAACCGCG AATACAGCTA CAAGGTGCTG
GAAAACCGGC TGCGGGAACT GGCGTTCCTG AATTCGGGCG TGCGCATCAT CCTGGAGGAC
GAGCGCCCCG CCGAGCCGCT GCGGACCGAG CTTTACTATG AAGGCGGCGT GCGGGAGTTC
GTGAAGTTCA TCGACCGCTC GAAAACCCCG GTCATGCCCG AGCCGATCTT CATCACCGGC
GAGCGCAACG GCATCGGCAT CGAGGTGGCG ATGTGGTGGA ACGACAGCTA CCATGAAACG
GTGCTGCCCT TTACCAACAA CATTCCGCAG CGCGACGGCG GCACGCATCT GGCCGGCTTT
CGCGGCGCGC TGACCCGCGT CATCAACAAT TACGCCCAAT CCAGTGGCGC GGCCCGCAAG
GAAAAGGTCG ATTTCACCGG CGACGACGCC CGCGAAGGGC TGACCTGCGT GCTGTCCGTA
AAGGTGCCGG ACCCGAAATT CTCCAGCCAG ACCAAGGACA AGCTGGTCTC GTCCGAGGTG
CGCCCGGCAG TCGAGGGACT GATCGGCGAG AAACTGGCCG AATGGTTCGA GGAAAACCCG
GCCGAGGCGA AATCCATCCT CGGCAAGATC ATCGAGGCGG CGCTGGCCCG CGAAGCGGCG
CGCAAGGCCC GCGAACTGAC ACGCCGCAAG ACCGCGATGG ACGTGGCCAG CCTGCCCGGC
AAGCTGGCCG ACTGCCAGGA AAAGGACCCG GCGCTGTCGG AACTGTTCAT CGTCGAGGGC
GACTCGGCCG GTGGCTCTGC CAAGCAGGGC CGTTCGCGCC AGAACCAGGC CGTGCTGCCG
CTTCGCGGCA AGATCCTGAA CGTGGAACGG GCACGGTTCG ACCGGATGCT GTCCAGCGAC
CAGATCGGCA CGCTGATCAC CGCGCTGGGG ACCGGCATCG GGCGTGACGA GTTCAACCTG
GACAAGCTGC GCTACCACAA GATCGTCATC ATGACCGATG CCGACGTGGA CGGTGCGCAT
ATCCGCACGC TGCTGCTGAC CTTCTTTTTC CGGCAGATGC CGGAGCTGAT CGAGGCAGGG
CATCTCTATA TCGCCCAGCC GCCGCTCTAC AAGGTCAGCC GCGGCCGCTC CGAGGTCTAT
CTGAAGGACG AGGCGGCGCT CGAGGATTAC CTGATCGAAC AGGGCGTCGA CGGCGCCAGC
CTGCGGCTTG GCAATGGCGA GACCCTGACC GGCGCCGACC TGGCCCGCGT GGTCGAGGAG
GCGCGCGTCG TGCGCCGCAT CCTGCGCGCC TATCCGACGC ATTATCCGCC CCATATCACC
GAGCAGGCCG CCATTGCCGG CGCACTGGTC CAGGGCCGGG TCGATGCCGA TGCGCAGGGG
GTGGCGAATG CCGTGGCGCA ACGCCTCGAC ATGATCGCCG AGGAATATGA GCGCGGCTGG
ACCGGCCGCC CGACGCAGGA TGCCGGTATT CGCCTGACCC GCCTGCTGCG CGGGGTCGAG
GAAAGCCGCA CCCTGGACGG CCCGATGCTG CGCAGCGCCG AAAGCCGGCG GCTGGGCGCG
ATGACCGATG CGCTGCGCGA TGTCTATGGC CAGACCGCGC AGTTGATCCG CAAGGATCGC
GGCATCCCGA TCCACGGCCC GATGAGCCTG CTGCAAGCCA TCTTCCTGGA AGGTGAAAAG
GGTCTGTCGC TGCAGCGCTA CAAGGGCCTG GGCGAAATGA ACCCCGAGCA GCTTTGGGAG
ACCACGCTGG ACCCGGCGGC ACGGACCATG TTGCAGGTGC GGGTCGAGGA TCTGGGCGAG
GCCGACGACA TCTTCACCAA GCTGATGGGC GATGTGGTCG AGCCGCGGCG CGACTTCATC
CAGCAGAACG CCCTGAGCGT GGAAAACCTG GATATCTGA
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| Protein sequence | MTEPAPQTSD YGADSIKVLK GLEAVRKRPG MYIGDTDDGS GLHHMVTEVV DNGIDEALAG
HADFVRVKIH ADGSVSVRDN GRGIPVDMHP TEGVSAAEVI MTQLHAGGKF DQNSYKVSGG
LHGVGVSVVN ALSDWLELRI WRGGKEHYAR FENGDTVEHL RVVGDAEPGE KGTEVRFLAS
SKEDRPDGTF LNREYSYKVL ENRLRELAFL NSGVRIILED ERPAEPLRTE LYYEGGVREF
VKFIDRSKTP VMPEPIFITG ERNGIGIEVA MWWNDSYHET VLPFTNNIPQ RDGGTHLAGF
RGALTRVINN YAQSSGAARK EKVDFTGDDA REGLTCVLSV KVPDPKFSSQ TKDKLVSSEV
RPAVEGLIGE KLAEWFEENP AEAKSILGKI IEAALAREAA RKARELTRRK TAMDVASLPG
KLADCQEKDP ALSELFIVEG DSAGGSAKQG RSRQNQAVLP LRGKILNVER ARFDRMLSSD
QIGTLITALG TGIGRDEFNL DKLRYHKIVI MTDADVDGAH IRTLLLTFFF RQMPELIEAG
HLYIAQPPLY KVSRGRSEVY LKDEAALEDY LIEQGVDGAS LRLGNGETLT GADLARVVEE
ARVVRRILRA YPTHYPPHIT EQAAIAGALV QGRVDADAQG VANAVAQRLD MIAEEYERGW
TGRPTQDAGI RLTRLLRGVE ESRTLDGPML RSAESRRLGA MTDALRDVYG QTAQLIRKDR
GIPIHGPMSL LQAIFLEGEK GLSLQRYKGL GEMNPEQLWE TTLDPAARTM LQVRVEDLGE
ADDIFTKLMG DVVEPRRDFI QQNALSVENL DI
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