Gene Pden_0401 details

Gene Information

• Locus tag: Pden_0401
• ID: 4578688
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Paracoccus denitrificans PD1222
• Kingdom: Bacteria
• Replicon accession: NC_008686
• Strand: +
• Start bp: 371378
• End bp: 371998
• Gene Length: 621 bp
• Protein Length: 206 aa
• Translation table: 11
• GC content: 68%
• IMG OID: 639767718
• Product: SH3 type 3 domain-containing protein
• Protein accession: YP_914211
• Protein GI: 119383155
• COG category: [S] Function unknown
• COG ID: [COG3650] Predicted membrane protein

Plasmid Coverage information

• Num covering plasmid clones: 42
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 7
• Fosmid unclonability p-value: 0.175354
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGCTGCGTA TCCTATTGAC CGGCCTCGTC CTTGCCGCGC CGCTGGCGGT GCAGGCGCAG 
GATTATCTGC CGAACCTGTT CGACGTCACC GTGGTCGAGA CCTGGGACAA GCTGAACGTG 
CGCGAGGCGC CGGACGGCCA GGCCAAGATC ATCGGCAGGC TTGCCTCGAC CGCCAAGGGC 
GTCGAGTTGC TGGACCGCGA CGCCTCGGGC AAGTGGGGGC TGGTGAACGT GGGCGAGACC 
ACGGGCTGGG TGGCGCTGCG CTTTCTCAAG CCGCAGGCCA CGGTCTGGAA GCCGGCCGAA 
CTGCCGCTGG CGCTGCGTTG CAGCGGAACC GAGCCCTTCT GGTCGGTCAA GACGGTGCAG 
AAAGGGCTGA TCTTCAGCGA GCCCGATGCG CCGGAGCGCC AGCTTTCGCT GCGCAAGGTC 
ATGGACCGCG GCATCGAGGG CGAGCCCACG CGGGGCATCA TCGCCGGCGA TGACAAGGGG 
CGGCTCACGG CGTTCATGCG GCCCGAGCAA TGTTCGGACG GCATGTCGGA CCGCGGCCAT 
GCGCTGGCGG TCAGCGTGAT CCTGGACGGG CAAGAGCAGC CCTCGCGCAT GTTGACGGGC 
TGCTGCTCGA TCGCGCCCTA G 

 

Protein sequence

MLRILLTGLV LAAPLAVQAQ DYLPNLFDVT VVETWDKLNV REAPDGQAKI IGRLASTAKG 
VELLDRDASG KWGLVNVGET TGWVALRFLK PQATVWKPAE LPLALRCSGT EPFWSVKTVQ 
KGLIFSEPDA PERQLSLRKV MDRGIEGEPT RGIIAGDDKG RLTAFMRPEQ CSDGMSDRGH 
ALAVSVILDG QEQPSRMLTG CCSIAP