Gene Pden_0398 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_0398 
Symbol 
ID4578685 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp368315 
End bp368557 
Gene Length243 bp 
Protein Length80 aa 
Translation table11 
GC content66% 
IMG OID639767715 
Productexodeoxyribonuclease VII, small subunit 
Protein accessionYP_914208 
Protein GI119383152 
COG category[L] Replication, recombination and repair 
COG ID[COG1722] Exonuclease VII small subunit 
TIGRFAM ID[TIGR01280] exodeoxyribonuclease VII, small subunit 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.526364 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGGGA CCGAGATCGA GAACATGTCC TTCGAGGAGG CGATGAAAGA GCTTGAGGCG 
ACCGTCGGTC GTCTGGAGCA TGGCGAGGCC ACGCTGGAGG AATCGATCAA GCTTTACGAA
CGCGGCGCGG CGTTGCGGGC GCATTGCGAC AAGCGCCTGC GCGAGGCCGA GGAGCGGGTC
GAAAAGATCA CGCTGGCGGC CAATGGCCAA CCCACGGGCA CCGTGCCGGC CGAGGGGCTG
TGA
 
Protein sequence
MTGTEIENMS FEEAMKELEA TVGRLEHGEA TLEESIKLYE RGAALRAHCD KRLREAEERV 
EKITLAANGQ PTGTVPAEGL