| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_0397 |
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| Symbol | |
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| ID | 4578684 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | + |
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| Start bp | 367359 |
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| End bp | 368318 |
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| Gene Length | 960 bp |
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| Protein Length | 319 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639767714 |
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| Product | histone deacetylase superfamily protein |
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| Protein accession | YP_914207 |
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| Protein GI | 119383151 |
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| COG category | [B] Chromatin structure and dynamics
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0123] Deacetylases, including yeast histone deacetylase and acetoin utilization protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.588931 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGCTTGCC GCGTGGGGAA GCTGCACATA ATCCTTGGGT GGATGACCTT GCTTTACACG
CATCCCTCGG GGCTTTCGCA TGTGACGCCG CCCAGCCATC CCGAACAGGT GGCCCGGCTG
GATGCCGTGC TGGCGGTGCT TGACGGGGCG GATCTTGAGC GGCGCGAGGC GCCCGAGGCG
GCGGATCAGG ACATTCTGCG CGCCCATCCT CCCGAATACC TGTCGCTCCT GCGCCGGAAG
GCGCCGGGCG AGGGCTGGAG CATGCTCGAT TCGGACACCT ATCTGTCGCC GGGCAGCCTG
AATGCGGCGC GCCATGCCGT CGGCGGGGTC TGCGCCGCCG TGGATGCGGT GCTGGCGGGC
GAGGCGCCCA GCGCCTTTGT CGCCATGCGA CCGCCGGGCC ATCATGCCGA GCGCATGAAG
GCCATGGGGT TCTGCATCTT TTCCTCGGTC GCGATCGGGG CGCTGCGGGC ATTGGAGCAT
CACGGGCTGG ACCGGGTGGC GGTGCTGGAT TTCGACGTGC ATCACGGCAA CGGCACGCAG
GACGTGCTGT GGGACGAGCG GCGGGCGCTG TTCGCCTCGA CGCATCAGGT GCCGCTTTAT
CCCGGCACGG GTGCGCCGTC GGAGCGGGGG GCGCATGGGC AGGTCGTCAA CCTCCCGCTG
GCGCCGGGCA GCGGCGGGGG CGAGGCCCGC GCGGTCTGGC AGGCGATCTG CGCCCGGGTC
GAGGCGTGGC GGCCGCAACT GGTGCTGGTC TCGGCCGGCT TCGATGCGCA TGCCGAGGAT
CCTCTGGCCT CGCTCATGTG GGACGATGGT GATTTCACCG CCATCACCCG GATGATCTGC
GATACGGCGG CGGCCTGTTC GGCCCCGGTG GTATCGGCGC TGGAAGGGGG CTATGATCTG
GCCGCTCTGG GCCGCTCGGC GCGCGCCCAT GTCGATGTGC TGAGGGAGAC TGCCGCGTGA
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| Protein sequence | MACRVGKLHI ILGWMTLLYT HPSGLSHVTP PSHPEQVARL DAVLAVLDGA DLERREAPEA
ADQDILRAHP PEYLSLLRRK APGEGWSMLD SDTYLSPGSL NAARHAVGGV CAAVDAVLAG
EAPSAFVAMR PPGHHAERMK AMGFCIFSSV AIGALRALEH HGLDRVAVLD FDVHHGNGTQ
DVLWDERRAL FASTHQVPLY PGTGAPSERG AHGQVVNLPL APGSGGGEAR AVWQAICARV
EAWRPQLVLV SAGFDAHAED PLASLMWDDG DFTAITRMIC DTAAACSAPV VSALEGGYDL
AALGRSARAH VDVLRETAA
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