Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_0359 |
Symbol | |
ID | 4580516 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008686 |
Strand | + |
Start bp | 336815 |
End bp | 338536 |
Gene Length | 1722 bp |
Protein Length | 573 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639767674 |
Product | phage terminase |
Protein accession | YP_914169 |
Protein GI | 119383113 |
COG category | [R] General function prediction only |
COG ID | [COG4626] Phage terminase-like protein, large subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGAACTG ACGATCTGCC GACGCCGGAG GTCTGGGACA CGTCCCTGCC GGACTGGAAA GAGCGCATCG TCAACCGCCG GCCGCTGATC CCGGATTTGC CGCTCTTCGA CGCAGTGGCG GAAAAGGCCC TGGCGATCTT CAAGCGGCTG CGGCTGCCGG ACGTGATCGG GAACCCGACC TTCGCCGAGG CGGGCGACGA CTGGATCTTC GATTTCGTCC GCGCCGTGTT CGGCAGCTAC GACCCAGTGC GCAAGGTGCG CATGATCCGG GAATTCCTGC TGCTGGTGCC CAAGGGCAAC GCCAAGACCA CCTATGCCGC GGCCATCATC CTCGTGGCCG CGATCATGAA CGAACGGCCG CATGCCGAAC TGATGCTGAT CGCGCCCAGC CAGAAGATCG CCAAGCGCGC CTTCAGCCAG GCCGCCGGCA TGATCCGGCT GGATGAAAGC CTGTCGGCGA TGTTCGACCC GAAGGCCTAC AGCAACGAGA TCGTCAAGCT CGACGAGGTA GTGCCGTCGA AGATCCAGAT CGTGTCGGCC GATCCGTCTG TGGTCACCGG CGCGATGGCG ACCTTCACGC TGATCGACGA GACGCACGAG TTCTCGAAGA TGTCGAAGGC GGCCGACGTG TTCGCCGAGA TCAAGGGCTC GCTCGGCAAG CGGCCGGACG GGTTCCTTTT GCAGATCACG ACGCAGTCGA AGGCGCCGCC GACCGGGGTC TGGAAGTCGG AACTGACCAT CGCCCGCAAG GTGCGGGACG GCGAGATGCG CCGGTCCATG CTGCCGGTGC TTTACGAACT GCCGCCGGAG ATGGCCAAGG ACGACGGCTG GCGGGATCGC CGCACCTGGG GGATGGTCAA CCCGAACCTC AATCGGTCGG TGACCGAGGA CTATATCGCC GGCGAGATCG AGAAAGCCGA AATCGACGGG CCGCACCAGA TGGCGCTGAT CGCGTCGCAG CACCTGAACG TCGAGATCGG CCAGGGGCTC AACGCGGATC GCTGGGCCGG GGCGCTCTAC TGGGCGAAGA ACGCGGTCAC GGGCCTGACC TTCGAGCGGA TGCTGGACGA GTGCGACGTG ATGGTTGCCG CGGGCGATGT CGGCGGCGCC GACGACCTGT TCGGTTTCTC GGCCATCGGC CGGCACCGCA AGAGCCGGAA CTGGCTGGTC TGGTGCTGGG CATGGTGCCT GCGGCCGGTC CTGGAACTGC GCAAGAGCAT CGCGCCGAAA CTGGAAGAGC TTGCCCAGCT TGGGCAGCTC GGGATCACGG ATACCGCGGC CGAGCAGGTC GAGGCGGCGG TGGAGATATG CTGCCGCATC CGCGATGCCG GGCTGTTCCC GAAGCAGGCC GGCATCGGCC TCGACCCCCA TGGCGTCGCC GCGCTGGTCG ATGCGCTGGA AGAGGAACGG TTCGAACTCG GCAAGCACAT CGTCCCGGTC GGGCAGGGCT ACAAGCTCAG CGGGGCGATC AAGGGCGTCG AACGCCGCCT GTTCGATGGT CGGATGAAGC ATGGCGGGCA GGAGCTGATG ACCTGGTGCG TCGGCAATGC CAAGGCCGAA CAGCGGGGTA ACAACGTGTA TGTGACGAAA GAGGCGGCGG GCGTCGCCAA GATCGATCCG CTGATTGCGC TGTTCACCGG CGCGATCCTC ATGGACGGCA ATCCCGAGCC CGCCGGCAAT CTGGACGATT TCCTGTCCGA TCCCGTTCTG GTGGCGCGCT GA
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Protein sequence | MRTDDLPTPE VWDTSLPDWK ERIVNRRPLI PDLPLFDAVA EKALAIFKRL RLPDVIGNPT FAEAGDDWIF DFVRAVFGSY DPVRKVRMIR EFLLLVPKGN AKTTYAAAII LVAAIMNERP HAELMLIAPS QKIAKRAFSQ AAGMIRLDES LSAMFDPKAY SNEIVKLDEV VPSKIQIVSA DPSVVTGAMA TFTLIDETHE FSKMSKAADV FAEIKGSLGK RPDGFLLQIT TQSKAPPTGV WKSELTIARK VRDGEMRRSM LPVLYELPPE MAKDDGWRDR RTWGMVNPNL NRSVTEDYIA GEIEKAEIDG PHQMALIASQ HLNVEIGQGL NADRWAGALY WAKNAVTGLT FERMLDECDV MVAAGDVGGA DDLFGFSAIG RHRKSRNWLV WCWAWCLRPV LELRKSIAPK LEELAQLGQL GITDTAAEQV EAAVEICCRI RDAGLFPKQA GIGLDPHGVA ALVDALEEER FELGKHIVPV GQGYKLSGAI KGVERRLFDG RMKHGGQELM TWCVGNAKAE QRGNNVYVTK EAAGVAKIDP LIALFTGAIL MDGNPEPAGN LDDFLSDPVL VAR
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