Gene Pden_0352 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_0352 
Symbol 
ID4579050 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp331125 
End bp332267 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content68% 
IMG OID639767667 
Producthypothetical protein 
Protein accessionYP_914162 
Protein GI119383106 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.605782 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCAGG ACGATCACCG CCTCGACGAA GCCAAGGCCA TGCCCATCGC CGATGTGGTG 
GCGCGGCTGG AGCTATCCGG CCTGGTCCGC ACCGGCGGCG AGCTGGTCGG GCCGTGCCCG
CAATGCGGCG GTCGGGATCG CTTCGGCGTC AACCTGAAGG ACGGGGTGTT CACCTGCCGC
AAGGAATGCG GGCCGCACGC CCGGGGCGAC CAGATCGCGC TGGTGCAGCA TGTGCTGGGG
CTGGATTTCC GCGGCGCACT GGAATGGCTT TGCGGCCCGG CCCAAGGCCT GTCCGATGCA
GAGCGTGCCG AGCGTCGGCG CAAGGCTGAA GCGAATCGGC GCAAGCAGGC CGATATCGCC
CGCCGTGCGC GCGAGAACTC GATCCGGGCC GCGCGGGATA TCTGGTTCGC CGCCGGCCCG
GCCGAGGGCA CGCTGGTGCG GGACTATCTG ACCCTGCGCG GTATCGATCC CGCGCATTAT
CCGGATCTGC CGCAGGTCCT GCGGTTCGAT CCCGAGGCGC GTTACACGAT CCCGGTCGAG
GGCAAGACGC AGGAATGGCA GACCGTGCAT GTCGGCCCGG CCATGGTCGC GGCCGTGGTC
GATGCCGGCA ACCGCGTGTC CGCGGTGCAT CGCACCTGGC TCGACCTGGA TCAGCCCAAG
GGCAAGCTGG TGCTGCCCGA TCCTCGCAAG CCGGGCGAGA CGCTGCCGGC CAAGAAGGTG
CTGGGCTCGA AGAAGGGCGC CGTCATCCGG TTCCTGACGC CACAGGACTG CGACACCATG
ATCATGGCCG AGGGGGTCGA GACGACCCTT TCCGCCCTGA TCGCGGAGGC CATGCCTCGG
CGCTGCGCCT ATTGGTGCGG CGTTGACCTG GGCAACATGG CCGGGCGCAT GCAGCGCGGC
CCCGGCCTGA AATATGCCGG CCTGCCCGAC ATGGACGATT CCGAGGCCTG GCTGCCGCCG
GTCTGGGTCA AGACGCTGAT CTTCGTCCAG GACGGGGACA GCGATCCGAA ACTGACGCGC
GCCAAGCTCC TCGCAGGGCT GCGGCGGGCA AAGAGGAAAA ATCCTGGTCT CATAGCCAAG
ATCGTCCATG CCGGCGAGGG CAGAGACCTG AACGATATCC TGATGGGACA GCGAGATGAG
TGA
 
Protein sequence
MTQDDHRLDE AKAMPIADVV ARLELSGLVR TGGELVGPCP QCGGRDRFGV NLKDGVFTCR 
KECGPHARGD QIALVQHVLG LDFRGALEWL CGPAQGLSDA ERAERRRKAE ANRRKQADIA
RRARENSIRA ARDIWFAAGP AEGTLVRDYL TLRGIDPAHY PDLPQVLRFD PEARYTIPVE
GKTQEWQTVH VGPAMVAAVV DAGNRVSAVH RTWLDLDQPK GKLVLPDPRK PGETLPAKKV
LGSKKGAVIR FLTPQDCDTM IMAEGVETTL SALIAEAMPR RCAYWCGVDL GNMAGRMQRG
PGLKYAGLPD MDDSEAWLPP VWVKTLIFVQ DGDSDPKLTR AKLLAGLRRA KRKNPGLIAK
IVHAGEGRDL NDILMGQRDE