Gene Pden_0324 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_0324 
Symbol 
ID4578805 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp307485 
End bp308516 
Gene Length1032 bp 
Protein Length343 aa 
Translation table11 
GC content69% 
IMG OID639767639 
Productputative ammonia monooxygenase 
Protein accessionYP_914134 
Protein GI119383078 
COG category[R] General function prediction only 
COG ID[COG3180] Putative ammonia monooxygenase 
TIGRFAM ID[TIGR03082] membrane protein AbrB duplication 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCTGC TGAACCGCCG CATCCTGACC TCTGCGCTGG CCGCCCTGGG CGGCGCGGCC 
TTTCTGCTGT TGCACCTGCC GCTGCCCATG CTGCTGGGAC CGATGCTGGC CTGCCTGATC
GCGGCGCTGG CGGGGGCGCC CCTGGCCGGG GCCGGACAGT TCGGCATCTT CATGCGCACC
ATCCTGGGGG TGGCGGTCGG CGCCTCGATC ACGCCCGGCG TGCTGGCGGA ACTGCCGGAC
GTGGCGGCCT CGCTGCTGTT CGTGCCGGGC TTCATCGGGG TGATCGCGCT GGTCGGTTAT
CCGCTGTTCC GCCGCGTCTT CGGCTTCGAC CACGCGACGG CATGGTATGG CGCCATGCCC
GGCGGCTTGC AGGACATGCT GGTCTTTGGC GAAGAGGCCG GCGGCGACAT CCGCGCATTG
TCGCTGATCC ATGCGACGCG GGTGCTGGTG ATCGTGACCG TCGCGCCGCT GATCATGACC
GCCTGGTGGG GCGTGGACCT GTCGCAGCCG CCCGGCACGC CGATGCGCGC CACTGGCGCG
GCCGAGATTG CGCTGATGGT CGCCGCCGGG CTGATCGGCT GGAAGGGGGC CGAGCGGCTG
GGCATCTTCG GCGCCTCGAT CCTGGGACCG ATGGTGCTGA CGGCGGCGCT GTCGCTGTCG
GGCCTGATCA CCCAACGCCC GCCGGCCGAG ATGATCCAGG CCGCGCAGTT CTTCATCGGC
ATCGCGGTCG GGGTGAAATA CGCCGGCATC ACCCTGCGCG AATTGCGGCT GCATGTGACG
GCCGGCATCG TCTATGCGCT GCTGCTGGCC TGGATCAGCC TGATCTTCAT CGAGGTGATC
GTGCATCTGC GGCTTGCGCC GGGGCTGGAC GCCTTCCTGG CGTTCCTGCC GGGTGGCCAG
GCCGAGATGG TGGTGATCGC ACTGATCGCC GGCGCGGACC TGGCCTATGT GGTCAGCCAT
CACCTGCTGC GCATGATCAT CGTCATCGTG CTGGGCCCGG TGGTGGGCAA GGTGCTGGGC
CGGCGCAGCT AG
 
Protein sequence
MSLLNRRILT SALAALGGAA FLLLHLPLPM LLGPMLACLI AALAGAPLAG AGQFGIFMRT 
ILGVAVGASI TPGVLAELPD VAASLLFVPG FIGVIALVGY PLFRRVFGFD HATAWYGAMP
GGLQDMLVFG EEAGGDIRAL SLIHATRVLV IVTVAPLIMT AWWGVDLSQP PGTPMRATGA
AEIALMVAAG LIGWKGAERL GIFGASILGP MVLTAALSLS GLITQRPPAE MIQAAQFFIG
IAVGVKYAGI TLRELRLHVT AGIVYALLLA WISLIFIEVI VHLRLAPGLD AFLAFLPGGQ
AEMVVIALIA GADLAYVVSH HLLRMIIVIV LGPVVGKVLG RRS