Gene Pden_0320 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_0320 
Symbol 
ID4578801 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp302525 
End bp303298 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content72% 
IMG OID639767635 
ProductLamB/YcsF family protein 
Protein accessionYP_914130 
Protein GI119383074 
COG category[R] General function prediction only 
COG ID[COG1540] Uncharacterized proteins, homologs of lactam utilization protein B 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCGCA ACATCGACCT GAACAGCGAC CTGGGCGAGG GCTATGGCGC CTGGAAGATG 
GGCGACGACG CCACCATGCT GGGCATCGTC AGCTCGGCCA ACGTCGCCTG CGGCTTTCAC
GCCGGCGATC CGCTGACCAT CCTTGTCACC GTGCGCGAGG CGGCGGCGCG GGGCGTGGCG
GTCGGCGCGC ATGTCTCCTA TCCTGACCGG GTGGGCTTCG GCCGCCGGCC TATGGACGTG
ACCCATGCCG AGCTGGCCGC GGACGTGATC TATCAGATCG GCGCGCTGCA AGGCATCTGC
GCCAGCGCCG GCACCCGCGT CAGCTATGTC AAGCCGCATG GCGCGCTTTA CAACACCATC
GCCACCGATC CCAGGCAGGG CGCTGCAGTG ATCGAGGGCA TCAAGGCCGT CGATCCGGGG
CTGGCCATGA TGGGCCTGGC CGGGACGCAG ATCCTGCGGC AAGCGGCCGA GGCCGGCCTG
CCCACCATCG CCGAGGCCTT CGCCGACCGC GCCTACCGCC CCGACGGTCA GCTCGTTTCG
CGCCGCGAGC CGGGCGCCGT GCTGCACGAC CCCGAGGCCG TCGCCGCCCG CATGCTGCGC
CTGGCGACCG ACGGCGAGGT CGAGGCGGCG GACGGCTCGG TCCTGCATCT GCACGCCGAC
AGCATCTGCG TGCATGGCGA CAGCCCCGGC GCCGTCGCCA TGGCCGCCCG CATCCGCGAG
GTGCTGCTGG CGGGCGGCGT TTCCATCGCC CCGGCTGCGG GGGGCGCGGC ATGA
 
Protein sequence
MTRNIDLNSD LGEGYGAWKM GDDATMLGIV SSANVACGFH AGDPLTILVT VREAAARGVA 
VGAHVSYPDR VGFGRRPMDV THAELAADVI YQIGALQGIC ASAGTRVSYV KPHGALYNTI
ATDPRQGAAV IEGIKAVDPG LAMMGLAGTQ ILRQAAEAGL PTIAEAFADR AYRPDGQLVS
RREPGAVLHD PEAVAARMLR LATDGEVEAA DGSVLHLHAD SICVHGDSPG AVAMAARIRE
VLLAGGVSIA PAAGGAA