Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_0320 |
Symbol | |
ID | 4578801 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008686 |
Strand | + |
Start bp | 302525 |
End bp | 303298 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 639767635 |
Product | LamB/YcsF family protein |
Protein accession | YP_914130 |
Protein GI | 119383074 |
COG category | [R] General function prediction only |
COG ID | [COG1540] Uncharacterized proteins, homologs of lactam utilization protein B |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCGCA ACATCGACCT GAACAGCGAC CTGGGCGAGG GCTATGGCGC CTGGAAGATG GGCGACGACG CCACCATGCT GGGCATCGTC AGCTCGGCCA ACGTCGCCTG CGGCTTTCAC GCCGGCGATC CGCTGACCAT CCTTGTCACC GTGCGCGAGG CGGCGGCGCG GGGCGTGGCG GTCGGCGCGC ATGTCTCCTA TCCTGACCGG GTGGGCTTCG GCCGCCGGCC TATGGACGTG ACCCATGCCG AGCTGGCCGC GGACGTGATC TATCAGATCG GCGCGCTGCA AGGCATCTGC GCCAGCGCCG GCACCCGCGT CAGCTATGTC AAGCCGCATG GCGCGCTTTA CAACACCATC GCCACCGATC CCAGGCAGGG CGCTGCAGTG ATCGAGGGCA TCAAGGCCGT CGATCCGGGG CTGGCCATGA TGGGCCTGGC CGGGACGCAG ATCCTGCGGC AAGCGGCCGA GGCCGGCCTG CCCACCATCG CCGAGGCCTT CGCCGACCGC GCCTACCGCC CCGACGGTCA GCTCGTTTCG CGCCGCGAGC CGGGCGCCGT GCTGCACGAC CCCGAGGCCG TCGCCGCCCG CATGCTGCGC CTGGCGACCG ACGGCGAGGT CGAGGCGGCG GACGGCTCGG TCCTGCATCT GCACGCCGAC AGCATCTGCG TGCATGGCGA CAGCCCCGGC GCCGTCGCCA TGGCCGCCCG CATCCGCGAG GTGCTGCTGG CGGGCGGCGT TTCCATCGCC CCGGCTGCGG GGGGCGCGGC ATGA
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Protein sequence | MTRNIDLNSD LGEGYGAWKM GDDATMLGIV SSANVACGFH AGDPLTILVT VREAAARGVA VGAHVSYPDR VGFGRRPMDV THAELAADVI YQIGALQGIC ASAGTRVSYV KPHGALYNTI ATDPRQGAAV IEGIKAVDPG LAMMGLAGTQ ILRQAAEAGL PTIAEAFADR AYRPDGQLVS RREPGAVLHD PEAVAARMLR LATDGEVEAA DGSVLHLHAD SICVHGDSPG AVAMAARIRE VLLAGGVSIA PAAGGAA
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