Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_0318 |
Symbol | |
ID | 4578799 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008686 |
Strand | - |
Start bp | 300271 |
End bp | 300927 |
Gene Length | 657 bp |
Protein Length | 218 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639767633 |
Product | GntR family transcriptional regulator |
Protein accession | YP_914128 |
Protein GI | 119383072 |
COG category | [K] Transcription |
COG ID | [COG1802] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGGAAG CACGCGAACC CGCCCCCAGC CTTGCCGAAG AGATCGCCGC CCGGCTGCGC GACCAGGTCA CCGGCGGCGC GCTGGTGCCC GGCCAGCGGC TGTCCGAGGC GCGGGTCGCA GCCGAACTCG ACATCTCGCG CAACACGCTG CGCGAGGTGT TCCGCCTGCT CACGCGCGAG GGCATCCTGC GGCACGAGCC GAACCGGGGC GTCTTCGTCG CCGTGCCCTC GATGGCCTCG ATCCTGGATA TCTATCGGGT GCGCCGGTTG ATCGAGGTGC CGGCGCTGGC CCAGGCATGG CCCGGCCATG CCGCTGTCGC CCGCATGCGC TCCGCCGTCG CGCGGGCCAC GGAATTGCAG CGCATCCCCG ACTGGCGCGG TGTCGGCAGC GCCAACATGG AATTTCACGC CGCCATCGTG GCGCTGACCG ACAGCCCGCG GCTGATCCAG TTCTTTACCC AGATCATCGC AGAGTTGCGG CTGGCCTTCG GCCTGCTCGA CAGTCCCGAA CTGCTGCACC GGCCCTATAT CCCGCGCAAT GCCGAAATTC TGGGCAGGCT GGAGGCCGGC GACCCGGCCG GCGCCTCTCG CATGCTGGAG GACTACCTGA ACCAGTCCGA GCGCGCCGTG CTGGAAGCCT TTGCCCGGCT GGGCTGA
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Protein sequence | MAEAREPAPS LAEEIAARLR DQVTGGALVP GQRLSEARVA AELDISRNTL REVFRLLTRE GILRHEPNRG VFVAVPSMAS ILDIYRVRRL IEVPALAQAW PGHAAVARMR SAVARATELQ RIPDWRGVGS ANMEFHAAIV ALTDSPRLIQ FFTQIIAELR LAFGLLDSPE LLHRPYIPRN AEILGRLEAG DPAGASRMLE DYLNQSERAV LEAFARLG
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