Gene Pden_0317 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_0317 
Symbol 
ID4579713 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp298982 
End bp300166 
Gene Length1185 bp 
Protein Length394 aa 
Translation table11 
GC content71% 
IMG OID639767632 
ProductCBS domain-containing protein 
Protein accessionYP_914127 
Protein GI119383071 
COG category[T] Signal transduction mechanisms 
COG ID[COG3448] CBS-domain-containing membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAGAC CGGCCGGGGC CGTGCTGCAC CAGATCGCGC AGGCGCTTGG CCCGGCAATC 
GCGCCCGGCT CGCCGCGCGA GGCGCTGCGG GCAGGGATCG GCGCGCTGGC AGGGCTGGGC
GTGTCGGGCC TGTTCCTGCT GTCGCCCACG ACCGACCTGC GGTTGGGGCT TTACATGATC
GCGCCCTTCG GGGCGACCTC GGTGCTGGTC TTCGCGGTGC CGAACAGCCC GCTGGCCCAG
CCCTGGTCTG CGGTGGTCGG CAATTGCGTC GCCGCCGCCG TCGGCGTGCT GGCCTGCATG
CTGACGCCAA GCTCGACACT GTGCGTCGCG CTGGCGGTGG GCGTCACCAT CACCGCAATG
ATCCTGCTGC GCGCCGTGCA TCCGCCGGCG GGCGCGGTCG CCATGACCGC CGCGCTGAAC
CCCGAGGCGA TCCGCGAACT GGGCTTTCAC TTCGTTCTGG CGCCGGTGCT GACCGGCACG
CTGGCACTGG TGGGCCTGGC CATGATCTAT GCCCGGCTGA CCGGGCGGCG CTATCCCTTT
CGCCAGTTCG ACGAGCCGGG CCCGCACGGC ACCGCCGACC ACCCGGCGAT GGAACGACTG
GGCCTGTCCA GGGAGGAGCT GACCGAGATC CTGCAACGCT ATCGCCAGTC GCTGAACCTG
GGCGTCGAGG ATCTGGCCCG CCTGATCGGC GCCGCCGAAT TGCAGGCCGC CACCCATCGC
ACCGGGCCGC TGACCGCGGC GGATGTCATG TCGCGCGACC TTGTCACCGT GGCGCCGCAT
ACGAGGCTGG TGCGCGTCGC CGACATCTTC CGCAAGCACG GCTTCACCTC GCTGCCGGTG
GTCGATGGCG AGGGCCGGTT CTGCGGCGTC ATCTTCCAGC TTCACCTGAT CCGCCGCGCC
CGCGACGACG CCTTTCGCCA CGACCGCCGC TTTTCCGCCG CAATGTCGGA CCTGCTGACC
CCAAGCCGCG GCATGCCGAC CCGCGCACGC GAGATCATGC AGACCGACCC GCCGCATGTC
GCGCCGGACA CCCCCATCGG GGCGCTGCTG CCGATGCTGG CCTCGGGCGA ATGCGATGCG
GTGCCGGTGC TGGACGGGCA GCGCATCGTC GGCATCGTCA CGCAGACCGA CCTGATCTCG
GCCCTGGCCC GGCAAAGCCT CCGGCAAGAT CTGCCGGCGC ATTGA
 
Protein sequence
MTRPAGAVLH QIAQALGPAI APGSPREALR AGIGALAGLG VSGLFLLSPT TDLRLGLYMI 
APFGATSVLV FAVPNSPLAQ PWSAVVGNCV AAAVGVLACM LTPSSTLCVA LAVGVTITAM
ILLRAVHPPA GAVAMTAALN PEAIRELGFH FVLAPVLTGT LALVGLAMIY ARLTGRRYPF
RQFDEPGPHG TADHPAMERL GLSREELTEI LQRYRQSLNL GVEDLARLIG AAELQAATHR
TGPLTAADVM SRDLVTVAPH TRLVRVADIF RKHGFTSLPV VDGEGRFCGV IFQLHLIRRA
RDDAFRHDRR FSAAMSDLLT PSRGMPTRAR EIMQTDPPHV APDTPIGALL PMLASGECDA
VPVLDGQRIV GIVTQTDLIS ALARQSLRQD LPAH