Gene Pden_0316 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_0316 
Symbol 
ID4579712 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp297929 
End bp298891 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content68% 
IMG OID639767631 
Productglycosyl transferase family protein 
Protein accessionYP_914126 
Protein GI119383070 
COG category[R] General function prediction only 
COG ID[COG1216] Predicted glycosyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.982236 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCGTC CCACGCTGGG CGCAGTGGCC ATCGGCCGCA ACGAGGGCGA GAGGCTGAAG 
GCCTGCCTGC GCTCGCTGGT GCCGCTTTGC GAGCGGGTGG TCTATGTGGA CAGCGGCTCG
CGCGACGACA GCGTAGCCTT TGCCCGCAGC CTCGGCGTCG ACGTGGTCGA GCTGGACACA
TCGGTTCCCT TCACCGCCGC CCGTGCCCGC AATGCCGGGG CAGAGGCGCT GCTGGCCGGC
GGCGATCTGG ATCTGGTGCA ATTCGTCGAT GGCGACTGCC GGGTCGAGCC GGGCTGGCTG
GAGGCCGGCA CCGCCGCCAT GCAGGCCGAT CCCGAACTGG GCCTCGTCAC CGGCTGGCGG
TCCGAGATCC ACCCCACGGC CACCGTCTAC AACCAGATGT GCGAGGTGGA CTGGCATCGT
CCCGCCGGCC CTATCGTGGC CTGCGGCGGC GACATGATGG TGCGCGCAGC GGCGTTTCGC
CGGATCGGCG GCTTCGACCC GACGGTGATC GCGGCCGAGG ACGACGAATT CTGCCTGCGC
CTGGGCAAGG CGGGCTGGAA GCTGGTGCGC CTGCCGGTGC AGATGACCTG GCACGACGCG
GACATGACCC GCTTTGGCCA ATGGTGGCAG CGCACCATCC GCAACGGCCA CGGCTTTGCG
CAGGTGGGCC GCATGCACCC GCCGCATTTC AGGCGCGAAA AGCTGCGGGT CTGGGCCTAT
GGGCTGGTGT TGCCGCTGGT CTTTCTGCTG GGGCTTTTCA CCAGCCTCTG GCTGTCGCTG
GCGGCGCTGG GGCTTTACGC GCTGTCTTTC TGGAAAACCC TCAAGGGGCT TCGGGGCCAG
CCGATGGCGG CGCGGCAAGC CGCGCTGCTG ACGCTGGCCA AGATCCCCAA TCTTCTGGGA
ATGCTGACAT ATTTCCGTCG CCGCCATAGG GGCGTCGCCA TGCATATTAT CGAGTATAAA
TAG
 
Protein sequence
MTRPTLGAVA IGRNEGERLK ACLRSLVPLC ERVVYVDSGS RDDSVAFARS LGVDVVELDT 
SVPFTAARAR NAGAEALLAG GDLDLVQFVD GDCRVEPGWL EAGTAAMQAD PELGLVTGWR
SEIHPTATVY NQMCEVDWHR PAGPIVACGG DMMVRAAAFR RIGGFDPTVI AAEDDEFCLR
LGKAGWKLVR LPVQMTWHDA DMTRFGQWWQ RTIRNGHGFA QVGRMHPPHF RREKLRVWAY
GLVLPLVFLL GLFTSLWLSL AALGLYALSF WKTLKGLRGQ PMAARQAALL TLAKIPNLLG
MLTYFRRRHR GVAMHIIEYK