| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_0311 |
|---|
| Symbol | |
|---|
| ID | 4579707 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Paracoccus denitrificans PD1222 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008686 |
|---|
| Strand | + |
|---|
| Start bp | 291488 |
|---|
| End bp | 292918 |
|---|
| Gene Length | 1431 bp |
|---|
| Protein Length | 476 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 639767626 |
|---|
| Product | integral membrane sensor signal transduction histidine kinase |
|---|
| Protein accession | YP_914121 |
|---|
| Protein GI | 119383065 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.932135 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGATCCGGC GGCCGTTTTC CCTGCGCCGT CGCCTGCTGG CCTGGCTGCT GCTGGCGACG
CTGGTGCTGG GAACCGCCGC GCTGATCGAC ACCTGGCGCG AGGCGGTGCG CATGGCCAAT
GCGCTGGCCG ACCGGGTGCT GGCCGGCTCG GCGCTGGTGA TCGCCGAGCG CGCCTCGCTG
GACGAGGACG GGCGCATCGC CATCGAGATC CCCTATGGCG CGCTGGAGAT GCTGAGTTCC
GCCGCGCAGG ACCGGGTCTT TTATCGCGTG GACGGCCCGC CGGGCCATAT CGTCACCGGC
TATGGCGACC TGCCGATGGC CCCGGCGCGG CCGGGCGGCG GGCCCGCCTA TGCCGACGAC
GTGTTCCGGG GCGAGCCGGT GCGGGTCGCC AGCCTGGCCC GCGCCGCCTC GACCGGCATC
GACGAGGTGC CCTTTGTCGT GACCGTGGCC GAGACCACCA ATGCCCGGCG CGAACTGACG
CGGGCGATCC TGATGCGCTC GGCCCTGCGG CTGGTGCTGA TGATCGCGGG GGCGGCGCTG
ATCGTCTGGA TCGCGGTCAC GCTGTCCCTG CGCCCGCTTT ACCGGCTGGG CGAGGAAATC
GCCGCCCGCA ATCCCGACGA CCTGAGCCCG ATCGAAACGC CGGTCCCGTC CGAGGTGCGC
GGGCTGGTCG GCACGGTGAA CGGCTTCATG CGGCGGCTGG GCGCGGCGCT GGACGGGATG
CGCAACTTCA CCGGCAACGC CGGGCACCAG CTGCGCACGC CGCTGGCCGT GGTGCGCACC
CAGCTGGCGC TGGCGGCGCG GGCCGCCAGC CTGCCCGAAG CGCAGGCCGC GGCGGCCAAG
GGCGATGCAG CCGTGGCCCA TGCCGAGCGC ATCCTTGCGC AACTGCTGCT GCTGGCCCGG
GTCGATACCG CCGAGGGCGC TGCGCTTGCC GCGCCGCTGG AACTGGCGGC GCTGGCCCGC
GACCTGACCG CCGAGCACAT CCCCGCCGCC GCCGAGGCCG GCATCGACCT GGGCTTCGAG
GGCGGGGGGC CTGTGACGGT CCGCGCCGAG CCGCTGCTTC TGGGCGAGGC GGTGAGCAAC
CTGATCTCGA ACGCGCTGCT GCATGCCGGC CGCGCGGCCG TGGTGACGGT GCGGGTCGGT
CGCGAGGGTG GCGATGCGGT GCTGGAGGTC GAGGATAACG GCCCCGGCAT CCCGCCCGCC
GCGCGTGCCG CCGCCGTCAG CCGATTCGCC CGCGGCCAGA CCTCGGGACC GGGGATGGGG
CTGGGCCTGC CGGTGGCACT GGAAATCGCC AGCCTGTTCG GTGGCCGGCT GGTGTTGGAC
GAGAGGGCCG GCGGGCGCGG GCTGTTGGCG CGGATCACCC TGCCGGCGCT GGCAACGACC
CGCTCAGCGC AAGAAAATGC CGGCATCGAC ACGGAACCCT TGCAATCGTG A
|
|---|
| Protein sequence | MIRRPFSLRR RLLAWLLLAT LVLGTAALID TWREAVRMAN ALADRVLAGS ALVIAERASL
DEDGRIAIEI PYGALEMLSS AAQDRVFYRV DGPPGHIVTG YGDLPMAPAR PGGGPAYADD
VFRGEPVRVA SLARAASTGI DEVPFVVTVA ETTNARRELT RAILMRSALR LVLMIAGAAL
IVWIAVTLSL RPLYRLGEEI AARNPDDLSP IETPVPSEVR GLVGTVNGFM RRLGAALDGM
RNFTGNAGHQ LRTPLAVVRT QLALAARAAS LPEAQAAAAK GDAAVAHAER ILAQLLLLAR
VDTAEGAALA APLELAALAR DLTAEHIPAA AEAGIDLGFE GGGPVTVRAE PLLLGEAVSN
LISNALLHAG RAAVVTVRVG REGGDAVLEV EDNGPGIPPA ARAAAVSRFA RGQTSGPGMG
LGLPVALEIA SLFGGRLVLD ERAGGRGLLA RITLPALATT RSAQENAGID TEPLQS
|
|---|
| |